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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
5
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
37
islet of Langerhans
20
EndoC_BH1
19
pancreatic ductal cell
16
body of pancreas
16
pancreas
14
pancreatic alpha cell
14
pancreatic beta cell
14
pancreatic delta cell
12
pancreatic acinar cell
11
endocrine pancreas
8
pancreatic stellate cell
6
pancreatic polypeptide-secreting cell
4
Panc1
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
3
pancreatic quiescent stellate cell
2
8988T
2
HPDE6-E6E7
2
pancreatic endocrine cell
1
activated pancreatic stellate cell
1
pancreatic A cell
1
quiescent pancreatic stellate cell
1
type B pancreatic cell
Disease term
2
pancreatic ductal adenocarcinoma
Organ
4
pancreas
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
encode-ccres
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
Showing 4 of 4 results
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Download
FileSet
DSR623CCG
released
Annotation file set
: Candidate regulatory elements for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR898MBY
released
Annotation file set
: Target gene predictions for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014CHT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Panc1
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988OGT
released
Annotation file set
: enhancer-gene predicton of Panc1-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP