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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Biosample type
2
primary cell
Biosample term
109
monocyte
54
common myeloid progenitor, CD34-positive
43
CD8-positive, alpha-beta T cell
34
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
22
CD8-positive, alpha-beta memory T cell
20
mononuclear cell
19
endothelial cell of umbilical vein
19
foreskin keratinocyte
18
hepatocyte
18
trophoblast cell
17
regulatory T cell
16
fibroblast of lung
16
foreskin fibroblast
15
T cell
15
T-helper 1 cell
15
natural killer cell
15
osteoblast
14
neutrophil
14
skeletal muscle myoblast
13
CD4-positive, alpha-beta T cell
13
T-helper 17 cell
13
T-helper 2 cell
13
keratinocyte
13
mammary epithelial cell
13
neurosphere
12
bronchial epithelial cell
12
endothelial cell
12
fibroblast of dermis
11
mammary gland epithelial cell
10
dermis blood vessel endothelial cell
10
endothelial cell of hepatic sinusoid
10
naive thymus-derived CD4-positive, alpha-beta T cell
9
epithelial cell of prostate
9
fibroblast
9
fibroblast of cardiac tissue
9
kidney tubule cell
9
mature neutrophil
9
naive T cell
9
retinal pigment epithelial cell
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
myoepithelial cell of mammary gland
8
pancreatic ductal cell
8
skeletal muscle satellite cell
8
smooth muscle cell
7
CD1c-positive myeloid dendritic cell
7
astrocyte
7
cardiac muscle cell
7
choroid plexus epithelial cell
7
epithelial cell of proximal tubule
7
mesenchymal stem cell
7
pulmonary artery endothelial cell
7
renal cortical epithelial cell
7
skin fibroblast
6
T-cell
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of esophagus
6
erythroblast
6
foreskin melanocyte
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
hepatic stellate cell
6
kidney epithelial cell
6
kidney glomerular epithelial cell
6
olfactory receptor cell
6
pancreatic beta cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
6
skeletal muscle fiber
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
5
brain microvascular endothelial cell
5
fibroblast of peridontal ligament
5
iris pigment epithelial cell
5
lung microvascular endothelial cell
5
macrophage
5
non-pigmented ciliary epithelial cell
5
pancreatic alpha cell
5
tracheal epithelial cell
5
type I muscle cell
5
type II muscle cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the spinal cord
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of the aortic adventitia
4
fibroblast of the conjunctiva
4
glutamatergic neuron
4
inflammatory macrophage
4
kidney capillary endothelial cell
4
myofibroblast cell
4
pancreatic acinar cell
4
pancreatic delta cell
4
preadipocyte
4
renal epithelial cell
4
stromal cell of bone marrow
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
adipocyte
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
bone marrow cell
3
brain pericyte
3
enterocyte
3
epidermal melanocyte
3
epithelial cell of amnion
3
erythroid cell
3
leukocyte
3
luminal epithelial cell of mammary gland
3
mammary stem cell
3
mast cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neoplastic cell
3
pericyte cell
3
peripheral blood stem cell
3
plasma cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD4-positive helper T cell
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
T follicular helper cell
2
Th2 cell
2
basal cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
dermis microvascular lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
erythroid progenitor cell
2
gamma-delta T cell
2
glial cell
2
goblet cell
2
head and neck squamous cell carcinoma
2
leukemic stem cell
2
mantle cell lymphoma cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
meso-epithelial cell
2
naive regulatory T cell
2
neural cell
2
neuronal stem cell
2
pancreatic endocrine cell
2
pancreatic polypeptide-secreting cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate gland cancer cell
2
renal proximal tubule cell
2
small cell ovarian carcinoma cell
2
somatic muscle myotube
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B cell, CD19-positive
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
activated CD4-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adult endothelial progenitor cell
1
alveolar cell type II
1
amniotic epithelial cell
1
aortic smooth muscle cell
1
bone cell
1
bronchial goblet cell
1
cell
Date released
2
May, 2020
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
assembly!
hg18
Showing 2 of 2 results
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Download
FileSet
DSR501WBU
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal gamma-delta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165DCP
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated gamma-delta T cell
Lab:
AMP-T2D consortium
Project:
AMP