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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
8
gene expression
2
binding sites
2
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
86
monocyte
41
stomach
38
heart
37
CD8-positive, alpha-beta T cell
33
lung
33
muscle of arm
32
brain
31
kidney
29
small intestine
28
adrenal gland
28
large intestine
28
muscle of back
28
placenta
27
common myeloid progenitor, CD34-positive
27
muscle of leg
26
left lung
22
A549
22
right lung
21
neural progenitor cell
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
20
thymus
19
renal pelvis
18
left kidney
16
B cell
15
liver
15
spinal cord
15
spleen
14
CD4-positive, alpha-beta memory T cell
12
foreskin keratinocyte
12
heart left ventricle
11
MCF-7
11
breast cancer cell
10
sigmoid colon
9
foreskin fibroblast
9
gastric cancer cell
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
K562
8
Rhabdomyosarcoma
8
body of pancreas
8
cardiac muscle cell
8
chorionic villus
8
gastrocnemius medialis
8
natural killer cell
8
neuroblastoma cell
8
ovary
8
testis
7
H9
7
HepG2
7
Peyer's patch
7
adipose tissue
7
diffuse intrinsic pontine glioma
7
endocrine pancreas
7
esophageal adenocarcinoma
7
hepatocyte
7
layer of hippocampus
7
mononuclear cell
7
muscle of trunk
7
neurosphere
7
psoas muscle
7
retina
7
skeletal muscle tissue
7
thyroid gland
7
upper lobe of left lung
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
T-helper 1 cell
6
bronchial epithelial cell
6
caudate nucleus
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
hESC cell
6
heart right ventricle
6
keratinocyte
6
left renal cortex interstitium
6
left renal pelvis
6
liposarcoma
6
lower leg skin
6
mammary epithelial cell
6
neuroblastoma cell line
6
prostate gland
6
right renal pelvis
6
temporal lobe
6
transverse colon
5
22Rv1
5
SK-N-DZ
5
T cell
5
T-cell acute lymphoblastic leukemia
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
breast epithelium
5
colonic mucosa
5
endodermal cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
fibroblast of cardiac tissue
5
foreskin melanocyte
5
gastroesophageal sphincter
5
melanoma cell
5
mesenchymal stem cell
5
mesodermal cell
5
neuronal stem cell
5
omental fat pad
5
osteosarcoma
5
pancreas
5
parathyroid adenoma
5
regulatory T cell
5
right renal cortex interstitium
5
squamous cell lung carcinoma
5
substantia nigra
4
HEK293
4
SK-N-SH
4
T-cell
4
angular gyrus
4
aorta
4
ascending aorta
4
cerebellum
4
cingulate gyrus
4
duodenal mucosa
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
mammary gland epithelial cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
neutrophil
4
osteoblast
4
peripheral blood mononuclear cell
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
stomach smooth muscle
4
subcutaneous abdominal adipose tissue
4
tibial nerve
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Ewing sarcoma
3
GM06990
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SK-MEL-5
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
acute myeloid leukemia
3
astrocyte
3
cardiac fibroblast
3
chorion membrane
3
choroid plexus epithelial cell
3
coronary artery
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
limb
3
lung microvascular endothelial cell
3
lymphoblast
3
lymphoblastoid cell line
3
mesendoderm
3
naive thymus-derived CD4-positive, alpha-beta T cell
Organ
2
embryo
Life stage
1
embryonic
Date released
1
February, 2021
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
assembly!
hg18
organ_slims!
uterus
Showing 2 of 2 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP