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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
stromal cell of bone marrow
3
megakaryocyte
3
mononuclear cell of bone marrow
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
bone marrow cell
Organ
3
bone element
3
bone marrow
Date released
2
January, 2021
1
November, 2021
Software used
2
macs
chicago
1
cicero
Lab
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
2
T1D
1
ENCODE
RFA
2
T1D
1
ENCODE3
assembly!
hg18
software_used.software.name!
chicago
Showing 3 of 3 results
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Download
FileSet
DSR326TXQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Megakaryocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR213MXZ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D