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Citing CMDGA
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Annotation type
2
gene expression
1
caQTL
Annotation Category
2
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
RNA-seq
1
snATAC-seq
Available data
1
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
3
coronary artery
3
heart
3
right atrium auricular region
3
smooth muscle cell of the coronary artery
2
heart left ventricle
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
heart right ventricle
1
left cardiac atrium
1
left ventricle myocardium
1
mitral valve
1
pulmonary valve
1
right cardiac atrium
1
tricuspid valve
Organ
3
artery
3
blood vessel
3
heart
3
vasculature
Life stage
2
adult
Date released
1
February, 2020
1
February, 2021
1
February, 2023
Software used
2
r
1
rasqual
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
assembly!
hg19
Showing 3 of 3 results
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Download
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR938TKW
released
Annotation file set
: Gene expression annotation of smooth muscle cell of the coronary artery for GSE113348
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR277QFW
released
Annotation file set
: Gene expression levels of Coronary artery smooth muscle cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP