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Annotation type
33
chromatin state
5
target gene predictions
3
accessible chromatin
2
eQTL
Annotation Category
5
Target gene links
Annotation type Category
3
ATAC-seq
2
HiC
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
44
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
cell line
Biosample term
3
colon epithelial cell
2
HCT116
Organ
52
uterus
51
embryo
49
epithelium
28
blood
28
bodily fluid
18
connective tissue
10
intestine
7
pancreas
5
large intestine
5
skin of body
4
adrenal gland
4
heart
4
stomach
3
lung
3
mammary gland
3
musculature of body
2
esophagus
2
small intestine
1
bronchus
1
gonad
1
liver
1
lymphatic vessel
1
lymphoid tissue
1
ovary
1
thyroid gland
1
vasculature
Date released
3
November, 2021
2
February, 2024
Software used
3
abc
Lab
3
Bing Ren, UCSD
2
AMP-T2D consortium
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
Showing 5 of 5 results
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Download
FileSet
DSR311TAK
released
Annotation file set
: Target gene predictions from Hi-C on HCT116. wild-type
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR162XYA
released
Annotation file set
: Target gene predictions from Hi-C on HCT116. WAPL KD
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267UWF
released
Annotation file set
: Target gene predictions of Colon Epithelial Cell 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR015DAN
released
Annotation file set
: Target gene predictions of Colon Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR659KQD
released
Annotation file set
: Target gene predictions of Colon Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE