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Annotation type
1
caQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
hg19
19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
8
macrophage
6
lymphoblastoid cell line
5
hepatocyte
4
endothelial cell of hepatic sinusoid
3
blood cell
3
islet of Langerhans
3
monocyte
3
skin of body
2
CD4-positive helper T cell
2
T cell
2
brain
2
coronary artery
2
fibroblast
2
iPSC derived cell line
2
muscle
2
putamen
2
regulatory T cell
2
substantia nigra
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
breast
1
caudate nucleus
1
cerebellar hemisphere
1
cerebellum
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
fibroblast of the aortic adventitia
1
frontal cortex
1
heart left ventricle
1
helper T cell
1
hypothalamus
1
layer of hippocampus
1
liver
1
lung
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
nucleus accumbens
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
retina
1
right atrium auricular region
1
sensory neuron
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stomach
1
subcutaneous adipose tissue
1
testis
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
1
epithelium
Date released
1
February, 2023
Software used
1
rasqual
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
assembly!
hg19
Showing 1 of 1 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP