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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
3
bigWig
1
bed bed9
File set status
4
released
Genome assembly (visualization)
15
hg19
4
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
22
fibroblast
19
pericyte cell
8
omental fat pad
7
adipose tissue
7
subcutaneous adipose tissue
6
fibroblast of cardiac tissue
4
osteoblast
4
skin fibroblast
3
cardiac fibroblast
3
adipocyte
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
mesenchymal stem cell
2
fat cell
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
luteal cell
2
mesangial cell
2
pancreatic stellate cell
2
stromal cell
1
GM23248
1
HT1080
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
brain pericyte
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
stromal cell of bone marrow
1
visceral abdominal adipose tissue
Organ
4
connective tissue
Life stage
3
unknown
1
adult
Date released
2
November, 2020
1
February, 2021
1
September, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR768TZR
released
Annotation file set
: Chromatin states for BSS01397 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR906VQP
released
Annotation file set
: GSE120755 DNase-seq accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383TPO
released
Annotation file set
: GSE120755 accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP