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Citing CMDGA
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Annotation type
3
accessible chromatin
2
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
16
fibroblast
9
pericyte cell
3
cardiac fibroblast
3
osteoblast
2
fibroblast of cardiac tissue
2
hepatic stellate cell
2
mesangial cell
2
omental fat pad
2
pancreatic stellate cell
2
subcutaneous adipose tissue
1
adipocyte
1
brain pericyte
1
luteal cell
1
skin fibroblast
1
stromal cell
Organ
3
connective tissue
2
pancreas
1
skin of body
Date released
2
February, 2024
1
November, 2021
Software used
3
macs
Lab
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR242BFD
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Quiescent Stellate
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR972BOL
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Active Stellate
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR579NBW
released
Annotation file set
: Accessible chromatin annotation of Fibroblast (Epithelial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE