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Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
16
small intestine
13
large intestine
7
colon epithelial cell
5
sigmoid colon
5
transverse colon
4
enteric smooth muscle cell
3
HCT116
3
Peyer's patch
3
enterocyte
2
colonic mucosa
2
duodenal mucosa
2
enterocyte of epithelium of small intestine
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
paneth cell
2
small intestine goblet cell
1
HT-29
1
SW480
1
colon sigmoid
1
rectum smooth muscle tissue
Disease term
1
colorectal adenocarcinoma
Organ
1
intestine
1
large intestine
Life stage
1
adult
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
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Download
FileSet
DSR361WKN
released
Annotation file set
: Chromatin states for BSS01682 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP