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Schema
Citing CMDGA
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Annotation type
4
candidate regulatory elements
4
target gene predictions
3
accessible chromatin
3
chromatin state
1
binding sites
1
caQTL
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
snRNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
4
foreskin fibroblast
3
osteoblast
2
adipocyte
2
fibroblast
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
mesenchymal stem cell
1
GM23248
1
adipose tissue
1
adipose tissue derived mesenchymal stem cell
1
cardiac fibroblast
1
chondrocyte
1
columnar chondrocyte
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
hepatic stellate cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
skin fibroblast
Organ
2
connective tissue
Date released
1
February, 2021
1
February, 2024
Software used
1
deeptools
1
macs
1
r
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR959CJP
released
Annotation file set
: Binding sites annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543XVO
released
Annotation file set
: Cell type gene expression mean TPM and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP