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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
111
monocyte
87
heart
84
stomach
74
kidney
70
brain
67
muscle of arm
66
lung
62
small intestine
60
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
48
CD8-positive, alpha-beta T cell
48
thymus
45
liver
45
right lung
42
B cell
42
hematopoietic multipotent progenitor cell
41
right kidney
40
renal cortex interstitium
40
renal pelvis
39
neural progenitor cell
38
retina
36
left kidney
32
CD4-positive, alpha-beta memory T cell
32
heart left ventricle
32
spleen
31
CD14-positive monocyte
31
endothelial cell
30
spinal cord
29
fibroblast
28
adipose tissue
26
adipocyte
25
islet of Langerhans
24
hepatocyte
24
smooth muscle cell
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
body of pancreas
22
foreskin keratinocyte
22
pericyte cell
22
tibial nerve
21
T cell
21
pancreas
20
mononuclear cell
20
natural killer cell
20
pigmented layer of retina
20
psoas muscle
19
caudate nucleus
19
endothelial cell of umbilical vein
19
mesenchymal stem cell
19
ovary
19
regulatory T cell
18
coronary artery
18
gastrocnemius medialis
18
heart right ventricle
18
macrophage
17
keratinocyte
17
muscle of trunk
17
thyroid gland
17
tibial artery
17
transverse colon
16
astrocyte
16
chorionic villus
16
fibroblast of lung
16
foreskin fibroblast
16
mammary gland epithelial cell
16
retinal pigment epithelial cell
16
right atrium auricular region
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
T-helper 1 cell
15
ascending aorta
15
endocrine pancreas
15
layer of hippocampus
15
omental fat pad
15
osteoblast
15
pancreatic ductal cell
15
skeletal muscle tissue
15
substantia nigra
15
testis
14
Peyer's patch
14
cardiac muscle cell
14
neutrophil
14
skeletal muscle myoblast
13
T-helper 17 cell
13
T-helper 2 cell
13
cerebellum
13
embryonic stem cell
13
excitatory neuron
13
frontal cortex
13
mammary epithelial cell
13
neurosphere
13
prostate gland
13
subcutaneous adipose tissue
12
aorta
12
bronchial epithelial cell
12
endothelial cell of hepatic sinusoid
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
left renal pelvis
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
pancreatic beta cell
12
skeletal muscle satellite cell
12
temporal lobe
11
Ammon's horn
11
breast epithelium
11
erythroblast
11
esophagus squamous epithelium
11
left cardiac atrium
11
left renal cortex interstitium
11
pancreatic acinar cell
11
pancreatic alpha cell
11
putamen
11
right renal pelvis
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
dermis blood vessel endothelial cell
10
esophagus muscularis mucosa
10
lower leg skin
10
neuronal stem cell
10
pancreatic delta cell
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
cingulate gyrus
9
duodenal mucosa
9
epithelial cell of prostate
9
esophagus
9
eye
9
foreskin melanocyte
9
kidney tubule cell
9
mature neutrophil
9
mesendoderm
9
mucosa of rectum
9
naive T cell
9
parathyroid adenoma
9
skin fibroblast
9
tongue
8
T-cell acute lymphoblastic leukemia
8
endodermal cell
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
limb
8
muscle layer of colon
8
muscle layer of duodenum
8
myoepithelial cell of mammary gland
8
neuroblastoma cell line
8
right lobe of liver
8
skeletal muscle fiber
8
stomach smooth muscle
7
CD1c-positive myeloid dendritic cell
7
choroid plexus epithelial cell
7
epithelial cell of proximal tubule
7
gastroesophageal sphincter
7
globus pallidus
7
hepatic stellate cell
7
luminal epithelial cell of mammary gland
7
mesodermal cell
7
midbrain
7
neural cell
7
occipital lobe
7
pulmonary artery endothelial cell
7
type I muscle cell
6
Brodmann (1909) area 46
6
T-cell
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
bipolar neuron
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dendritic cell
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of esophagus
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
kidney epithelial cell
6
kidney glomerular epithelial cell
6
memory B cell
6
muscle cell
6
neuron
6
olfactory receptor cell
6
renal cortical epithelial cell
6
right cardiac atrium
6
superior temporal gyrus
6
urinary bladder
6
vagina
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
SGBS preadipocytes
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_type!
cell line
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP