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Schema
Citing CMDGA
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Annotation type
4
eQTL
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
variant allelic effects
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
1
RNA microarray
Available data
1
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
1
hg18
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
9
islet of Langerhans
5
liver
4
subcutaneous adipose tissue
3
adipose tissue
2
blood
2
cartilage tissue
2
skeletal muscle tissue
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
hypothalamus
1
kidney
1
left ventricle myocardium
1
nephron tubule
1
nucleus accumbens
1
omental fat pad
1
putamen
1
renal glomerulus
1
right atrium auricular region
1
right lobe of liver
1
substantia nigra
1
synovial joint
1
tibial artery
1
tibial nerve
Organ
4
adipose tissue
4
connective tissue
Life stage
4
adult
Date released
2
August, 2021
1
February, 2020
1
February, 2021
Software used
1
epacts
1
fast-lmm
1
fastqtl
1
gtex_eqtl:V8
1
matrix-eQTL
Lab
3
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669QFK
released
Annotation file set
: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR655IYK
released
Annotation file set
: eQTL of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP