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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
112
monocyte
66
heart
65
stomach
61
HeLa-S3
58
kidney
52
brain
51
muscle of arm
50
lung
48
CD8-positive, alpha-beta T cell
47
small intestine
46
adrenal gland
45
H1-hESC
45
placenta
44
A549
43
large intestine
43
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
39
neural progenitor cell
38
liver
37
thymus
35
K562
35
retina
34
B cell
34
right lung
32
hematopoietic multipotent progenitor cell
31
endothelial cell
31
renal cortex interstitium
31
renal pelvis
31
right kidney
30
fibroblast
27
CD14-positive monocyte
27
left kidney
27
spinal cord
26
spleen
25
islet of Langerhans
24
heart left ventricle
23
CD4-positive, alpha-beta memory T cell
23
adipocyte
23
smooth muscle cell
22
adipose tissue
22
hepatocyte
22
macrophage
21
MCF-7
21
pericyte cell
20
breast cancer cell
20
pigmented layer of retina
19
keratinocyte
18
HFFc6
18
body of pancreas
18
foreskin keratinocyte
18
pancreas
18
tibial nerve
17
T cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
cardiac muscle cell
16
natural killer cell
16
regulatory T cell
15
CD4-positive, alpha-beta T cell
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
caudate nucleus
15
coronary artery
15
mesenchymal stem cell
15
ovary
15
pancreatic ductal cell
15
psoas muscle
15
retinal pigment epithelial cell
14
HepG2
14
astrocyte
14
endothelial cell of umbilical vein
14
gastrocnemius medialis
14
mononuclear cell
14
transverse colon
13
fibroblast of cardiac tissue
13
osteoblast
13
right atrium auricular region
13
subcutaneous adipose tissue
13
substantia nigra
13
thyroid gland
13
tibial artery
13
upper lobe of left lung
12
EndoC_BH1
12
excitatory neuron
12
fibroblast of lung
12
heart right ventricle
12
layer of hippocampus
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
neutrophil
12
omental fat pad
12
pancreatic beta cell
12
skeletal muscle tissue
12
testis
11
T-helper 1 cell
11
chorionic villus
11
endothelial cell of hepatic sinusoid
11
erythroblast
11
mammary gland epithelial cell
11
pancreatic acinar cell
11
skeletal muscle myoblast
10
Ammon's horn
10
Peyer's patch
10
Rhabdomyosarcoma
10
ascending aorta
10
bronchial epithelial cell
10
embryonic stem cell
10
endocrine pancreas
10
gastric cancer cell
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
neuronal stem cell
10
pancreatic alpha cell
10
prostate gland
10
putamen
10
right renal pelvis
10
skeletal muscle satellite cell
9
T-helper 2 cell
9
cerebellum
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
fibroblast of dermis
9
frontal cortex
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
pancreatic delta cell
9
skin fibroblast
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
breast epithelium
8
choroid plexus epithelial cell
8
fibroblast cell line
8
left cardiac atrium
8
pituitary stalk
8
skeletal muscle fiber
8
temporal lobe
8
trophoblast
7
GM06990
7
GM12864
7
GM12865
7
HAP-1
7
HT-29
7
IMR-90
7
Jurkat
7
T-helper 17 cell
7
aorta
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
kidney tubule cell
7
lower leg skin
7
mature neutrophil
7
mesendoderm
7
thoracic aorta
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19240
6
HUES8
6
KARPAS-422 cell
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
chondrocyte
6
cingulate gyrus
6
colon epithelial cell
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
neuroblastoma cell line
6
parathyroid adenoma
6
tongue
6
type I muscle cell
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
CyT49
5
Daoy
5
Ewing sarcoma
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
files.file_type!
bed bed9
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP