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Schema
Citing CMDGA
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Annotation type
5
accessible chromatin
1
binding sites
1
histone modifications
0
Fine-mapped variants
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
23
retina
20
pigmented layer of retina
17
monocyte
16
fibroblast
15
endothelial cell
13
excitatory neuron
12
macrophage
10
kidney
10
neural progenitor cell
10
pericyte cell
9
islet of Langerhans
9
retinal pigment epithelial cell
9
smooth muscle cell
8
B cell
8
EndoC_BH1
8
astrocyte
8
hepatocyte
7
T cell
7
pancreatic ductal cell
6
SGBS preadipocytes
6
adipocyte
6
coronary artery
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
pancreatic acinar cell
6
pancreatic beta cell
6
right atrium auricular region
6
tibial artery
6
tibial nerve
5
Ammon's horn
5
caudate nucleus
5
chondrocyte
5
erythroblast
5
frontal cortex
5
heart
5
inhibitory neuron
5
omental fat pad
5
osteoblast
5
pancreas
5
pancreatic alpha cell
5
putamen
5
skeletal muscle fiber
5
skeletal muscle satellite cell
5
subcutaneous adipose tissue
4
CD8-positive, alpha-beta T cell
4
ascending aorta
4
cerebellum
4
fibroblast of cardiac tissue
4
liver
4
regulatory T cell
4
type II pneumocyte
3
cardiac fibroblast
3
C1 segment of cervical spinal cord
3
T-helper 1 cell
3
amygdala
3
anterior cingulate cortex
3
body of pancreas
3
cerebellum (Hemisphere)
3
colon epithelial cell
3
cortical cell of adrenal gland
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
gastrocnemius medialis(Muscle - Skeletal)
3
glomerular visceral epithelial cell
3
heart left ventricle
3
hepatic stellate cell
3
hypothalamus
3
left ventricle myocardium
3
memory B cell
3
mesenchymal stem cell
3
natural killer cell
3
nucleus accumbens
3
pancreatic delta cell
3
pancreatic stellate cell
3
right lobe of liver
3
skin fibroblast
3
stomach
3
substantia nigra
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
globus pallidus
2
glomerular endothelial cell
2
keratinocyte
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mature natural killer cell
2
medulla oblongata
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
midbrain
2
muscle of leg
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
neuron
2
occipital lobe
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
plasma cell
2
pons
2
renal cortical epithelial cell
2
renal pelvis
2
schwann cell
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
superior temporal gyrus
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
Organ
5
connective tissue
Date released
5
November, 2022
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
award.project!
T1D
Showing 5 of 5 results
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Download
FileSet
DSR632VXG
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Proximal femoral growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956OYT
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Distal femoral growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR870XSB
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Proximal tibial growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR599ELD
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Distal tibial growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR696CUX
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Acetabulum E67
Lab:
AMP-T2D consortium
Project:
AMP