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Schema
Citing CMDGA
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Annotation type
23
candidate regulatory elements
13
target gene predictions
11
chromatin state
7
accessible chromatin
5
eQTL
4
gene expression
4
variant allelic effects
3
Fine-mapped variants
Annotation Category
4
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
ATAC-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
epithelial cell of esophagus
2
tibial nerve
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Life stage
1
adult
Date released
2
February, 2024
2
May, 2020
Software used
4
deltasvm
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
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community
Showing 4 of 4 results
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FileSet
DSR545JGJ
released
Annotation file set
: Variant allelic effects annotation of Esophageal epithelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR761QWI
released
Annotation file set
: Variant allelic effects annotation of Esophageal epithelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR872IOC
released
Annotation file set
: Genetic variants with deltaSVM predictions in tibial nerve ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR168URY
released
Annotation file set
: Genetic variants with deltaSVM predictions in nerve tibial DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP