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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
binding sites
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
18
brain
5
temporal lobe
4
angular gyrus
4
caudate nucleus
4
foreskin keratinocyte
4
layer of hippocampus
3
cingulate gyrus
3
fibroblast of dermis
3
keratinocyte
3
substantia nigra
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
cerebellum
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
foreskin fibroblast
2
frontal cortex
2
lower leg skin
2
skin fibroblast
1
A172
1
Ammon's horn
1
BE(2)-C
1
COLO829
1
Daoy
1
GM23248
1
H54
1
M059J
1
RPMI7951
1
SK-MEL-5
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
epidermal melanocyte
1
globus pallidus
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
1
skin of body
Organ
3
epithelium
3
skin of body
0
brain
Life stage
2
unknown
Date released
2
September, 2022
1
August, 2017
Software used
3
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
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community
Showing 3 of 3 results
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Download
FileSet
DSR550OVN
released
Annotation file set
: Chromatin states for BSS01071 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR081LIX
released
Annotation file set
: Chromatin states for BSS01068 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR926942
released
Annotation file set
: ChromHMM 13-state model for NHEK
Lab:
Stephen Parker, UMich
Project:
AMP