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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
binding sites
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
10
kidney
3
glomerular visceral epithelial cell
3
skin fibroblast
2
glomerular endothelial cell
2
keratinocyte
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
2
renal pelvis
1
ACHN
1
Caki2
1
GM23248
1
HEK293
1
RCC 7860
1
RPMI7951
1
basal cell of epidermis
1
cortex of kidney
1
dermis microvascular lymphatic vessel endothelial cell
1
epithelial cell of proximal tubule
1
foreskin fibroblast
1
foreskin keratinocyte
1
glomerular epithelium
1
granular cell of epidermis
1
iPS DF 4.7 Cell Line
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
left renal pelvis
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
ureteric bud
Organ
2
epithelium
2
skin of body
0
kidney
Date released
2
November, 2021
Software used
2
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
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Showing 2 of 2 results
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Download
FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE