Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
2
Genetic variant effects
2
Others
Annotation type Category
1
ChIP-seq
1
quantitative proteomics
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
1
Pancreatic islets
1
cerebrospinal fluid
1
naive thymus-derived CD4-positive, alpha-beta T cell
Organ
1
bodily fluid
Life stage
2
adult
Date released
1
August, 2021
1
May, 2020
1
May, 2021
1
November, 2019
Software used
1
limix
1
macs
1
r
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
4
AMP
2
ITG
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048FDK
released
Annotation file set
: Test annotation
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP