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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
129
monocyte
88
heart
86
stomach
79
kidney
71
brain
68
lung
66
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
placenta
57
muscle of leg
56
large intestine
54
H1-hESC
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
neural progenitor cell
49
liver
48
thymus
47
CD8-positive, alpha-beta T cell
45
right lung
43
hematopoietic multipotent progenitor cell
43
islet of Langerhans
42
right kidney
41
K562
40
B cell
39
renal cortex interstitium
39
renal pelvis
39
retina
36
left kidney
35
spinal cord
34
hepatocyte
34
spleen
32
CD4-positive, alpha-beta memory T cell
32
heart left ventricle
31
CD14-positive monocyte
30
adipose tissue
26
MCF-7
26
regulatory T cell
25
adipocyte
24
tibial nerve
23
T-helper 1 cell
23
body of pancreas
23
endothelial cell
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
22
foreskin keratinocyte
21
EndoC_BH1
21
T-helper 17 cell
20
breast cancer cell
20
caudate nucleus
20
glomerular endothelial cell
20
mononuclear cell
20
natural killer cell
20
ovary
20
pancreas
20
pancreatic ductal cell
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
foreskin fibroblast
19
macrophage
19
mesenchymal stem cell
18
HFFc6
18
coronary artery
18
embryonic stem cell
18
gastrocnemius medialis
18
thyroid gland
18
transverse colon
17
HepG2
17
T cell
17
T-helper 2 cell
17
endothelial cell of umbilical vein
17
heart right ventricle
17
keratinocyte
17
muscle of trunk
17
osteoblast
17
right atrium auricular region
17
testis
16
GM12878
16
chorionic villus
16
fibroblast of lung
16
layer of hippocampus
16
omental fat pad
16
skeletal muscle myoblast
16
skeletal muscle tissue
16
substantia nigra
16
tibial artery
16
upper lobe of left lung
15
cerebellum
15
neutrophil
14
H9
14
ascending aorta
14
cardiac muscle cell
14
endocrine pancreas
14
endothelial cell of hepatic sinusoid
14
mammary gland epithelial cell
14
prostate gland
13
CD4-positive, alpha-beta T cell
13
Peyer's patch
13
bronchial epithelial cell
13
fibroblast of cardiac tissue
13
frontal cortex
13
neurosphere
13
putamen
13
retinal pigment epithelial cell
13
smooth muscle cell
13
temporal lobe
12
fibroblast
12
fibroblast of dermis
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
pancreatic beta cell
11
aorta
11
breast epithelium
11
epithelial cell of prostate
11
naive thymus-derived CD4-positive, alpha-beta T cell
10
22Rv1
10
Ammon's horn
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
glomerular visceral epithelial cell
10
left cardiac atrium
10
lymphocyte
10
neuronal stem cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
induced pluripotent stem cell
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal pelvis
9
skeletal muscle satellite cell
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
choroid plexus epithelial cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
kidney tubule cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pancreatic delta cell
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
hepatic stellate cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
January, 2020
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP