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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
127
monocyte
88
heart
83
stomach
80
kidney
72
brain
68
lung
67
muscle of arm
64
HeLa-S3
62
small intestine
61
A549
61
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
53
H1-hESC
52
left lung
51
neural progenitor cell
48
liver
47
thymus
46
CD8-positive, alpha-beta T cell
44
right lung
43
islet of Langerhans
42
hematopoietic multipotent progenitor cell
42
right kidney
40
K562
40
renal cortex interstitium
39
renal pelvis
39
retina
38
B cell
36
left kidney
34
heart left ventricle
34
hepatocyte
33
spinal cord
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
adipose tissue
25
MCF-7
24
adipocyte
24
body of pancreas
24
regulatory T cell
24
tibial nerve
23
endothelial cell
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
22
T-helper 1 cell
22
sigmoid colon
22
trophoblast cell
21
EndoC_BH1
21
T-helper 17 cell
21
caudate nucleus
21
foreskin keratinocyte
21
subcutaneous adipose tissue
20
breast cancer cell
20
coronary artery
20
glomerular endothelial cell
20
mononuclear cell
20
pancreas
20
pigmented layer of retina
19
heart right ventricle
19
natural killer cell
19
ovary
19
pancreatic ductal cell
19
psoas muscle
18
HFFc6
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
macrophage
18
mesenchymal stem cell
18
right atrium auricular region
18
substantia nigra
17
T-helper 2 cell
17
cardiac muscle cell
17
keratinocyte
17
muscle of trunk
17
omental fat pad
17
thyroid gland
17
tibial artery
17
transverse colon
16
T cell
16
chorionic villus
16
fibroblast of lung
16
gastrocnemius medialis
16
layer of hippocampus
16
skeletal muscle tissue
16
testis
15
GM12878
15
H9
15
HepG2
15
ascending aorta
15
cerebellum
15
neutrophil
15
osteoblast
15
skeletal muscle myoblast
15
upper lobe of left lung
14
endocrine pancreas
14
endothelial cell of hepatic sinusoid
14
frontal cortex
14
retinal pigment epithelial cell
13
CD4-positive, alpha-beta T cell
13
aorta
13
mammary gland epithelial cell
13
neurosphere
13
prostate gland
13
putamen
13
smooth muscle cell
13
temporal lobe
12
Peyer's patch
12
bronchial epithelial cell
12
fibroblast
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
left renal cortex interstitium
12
neuroblastoma cell
12
pancreatic beta cell
11
Ammon's horn
11
left cardiac atrium
11
left renal pelvis
11
lymphoblastoid cell line
11
mammary epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
right renal pelvis
10
22Rv1
10
epithelial cell of prostate
10
gastric cancer cell
10
glomerular visceral epithelial cell
10
lymphocyte
10
pancreatic acinar cell
10
pancreatic alpha cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
thoracic aorta
9
Rhabdomyosarcoma
9
SK-N-SH
9
breast epithelium
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
esophagus squamous epithelium
9
induced pluripotent stem cell
9
kidney tubule cell
9
liposarcoma
9
neuronal stem cell
9
parathyroid adenoma
9
skeletal muscle satellite cell
9
trophoblast
9
vagina
8
B-lymphoblastoid cell line
8
HEK293
8
choroid plexus epithelial cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
esophagus muscularis mucosa
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
pancreatic delta cell
8
pituitary stalk
8
tongue
7
GM12865
7
IMR-90
7
NAMALWA cell
7
SK-N-DZ
7
SK-N-MC
7
T47D
7
amygdala
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
foreskin melanocyte
7
hepatic stellate cell
7
limb
7
mature neutrophil
7
mesendoderm
7
pancreatic stellate cell
7
right lobe of liver
7
stomach smooth muscle
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
June, 2020
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP