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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
7
accessible chromatin
4
histone modifications
3
candidate regulatory elements
3
target gene predictions
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
3
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
3
breast epithelium
3
epithelial cell of prostate
3
hepatocyte
3
keratinocyte
3
mammary gland epithelial cell
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
esophagus squamous epithelium
2
kidney tubule cell
2
myoepithelial cell of mammary gland
1
EndoC_BH1
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
type B pancreatic cell
Organ
3
epithelium
3
liver
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
1
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
1
ENCODE
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR926ULW
released
Annotation file set
: Target gene predictions for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR361WHM
released
Annotation file set
: Target gene predictions for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR604IOP
released
Annotation file set
: enhancer-gene predicton of hepatocyte-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP