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Schema
Citing CMDGA
Clear Filters
Annotation type
6
gene expression
5
accessible chromatin
3
differential activity
2
binding sites
2
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
4
bigWig
1
bigBed narrowPeak
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
8
EndoC_BH1
6
islet of Langerhans
5
pancreas
5
pancreatic ductal cell
4
pancreatic beta cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic stellate cell
2
pancreatic delta cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic polypeptide-secreting cell
1
type B pancreatic cell
Organ
5
epithelium
5
pancreas
Life stage
1
adult
1
child
Date released
3
February, 2024
1
June, 2020
1
October, 2019
Software used
5
macs
Lab
3
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Project
5
AMP
2
ENCODE
1
T1D
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR473EZY
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of MUC5B Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR183WZN
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR434XUW
released
Annotation file set
: Accessible chromatin annotation for Pancreas HPDE6 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR553FGJ
released
Annotation file set
: pancreatic ductal cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR920WKD
released
Annotation file set
: Pancreatic ductal cell accessible chromatin annotation of overlapping ATAC-seq sites from 3 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP