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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
SNP-SELEX
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Biosample term
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
conventional dendritic cell
2
endothelial cell
2
macrophage
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
regulatory T cell
2
stellate neuron
1
purified protein and synthetic DNA oligo binding assay
Date released
1
February, 2023
Software used
1
betacells_cytokines_t1d
Lab
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
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FileSet
DSR976GBT
released
Annotation file set
: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab:
Kyle Gaulton, UCSD
Project:
T1D