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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
eQTL
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
RNA-seq
1
snATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
39
tissue
7
cell line
4
primary cell
Biosample term
2
luteal cell
1
Leydig cell
1
somatic gonadal cell
Organ
819
epithelium
309
kidney
283
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Date released
2
November, 2021
1
January, 2022
1
June, 2020
Software used
2
macs
1
abc
1
qTLtools
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
biosample_term_name!
BJ cell
Showing 4 of 4 results
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Download
FileSet
DSR212NXP
released
Annotation file set
: HLC eQTL of studay PhLiPS from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR562HUD
released
Annotation file set
: Accessible chromatin annotation of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR547ORX
released
Annotation file set
: Accessible chromatin annotation for Gonad Gonad somatic cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP