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Annotation type
1
eQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
RNA microarray
1
RNA-seq
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
subcutaneous adipose tissue
Organ
7
pancreas
3
kidney
2
epithelium
1
adipose tissue
1
connective tissue
1
musculature of body
Life stage
1
adult
Date released
1
August, 2021
Software used
135
r
130
macs
59
chromhmm
40
encode-ccres
31
abc
16
deltasvm
9
qTLtools
8
deseq2
5
fastqtl
4
chicago
4
peer
2
deeptools
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
mach2qtl
2
nospecificsoft_customcode
2
rasqual
2
samtools
2
umitools
1
cicero
1
eigenmt
1
emmax
1
epacts
1
fast-lmm
1
matrix-eQTL
1
probabel
1
seurat
1
unknown
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
CD1c-positive myeloid dendritic cell
Showing 1 of 1 results
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FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP