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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
RNA-seq
Available data
1
bed bed3+
1
bigWig
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
kidney
Disease term
59
chronic kidney disease
57
acute kidney failure
55
Acute kidney failure, unspecified
55
Chronic kidney disease (CKD)
54
lung epithelial-myoepithelial carcinoma
24
Philadelphia-positive myelogenous leukemia
20
age-related macular degeneration
18
large-cell immunoblastic lymphoma
15
breast cancer
15
colorectal adenocarcinoma
15
neuroblastoma
12
prostate adenocarcinoma
9
acute lymphoblastic leukemia
9
cervical adenocarcinoma
9
endometrium adenocarcinoma
9
glioblastoma
9
parathyroid gland clear cell adenoma
6
Burkitt lymphoma
6
acute promyelocytic leukemia
6
breast ductal adenocarcinoma
6
hepatocellular carcinoma
6
melanoma
6
osteosarcoma
6
plasma cell myeloma
6
renal cell adenocarcinoma
5
coronary artery disease
4
anosmia
4
squamous cell carcinoma
3
Ewing sarcoma
3
adenoid cystic carcinoma
3
clear cell renal carcinoma
3
colon carcinoma
3
fibrosarcoma
3
glioma
3
lung adenocarcinoma
3
lung large cell carcinoma
3
metastatic melanoma
3
pancreatic adenocarcinoma
3
pancreatic ductal adenocarcinoma
3
prostate cancer
3
prostate carcinoma
3
retinoblastoma
3
testicular embryonal carcinoma
2
diabetes mellitus,hypertensive disorder
2
hypertensive disorder
1
chronic kidney disease, hypertensive disorder
1
colorectal cancer
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
heart failure
1
hypertensive disorder, chronic kidney disease
1
small cell lung carcinoma
1
type 2 diabetes mellitus
Organ
2
kidney
Date released
1
August, 2021
1
February, 2021
Software used
1
macs
1
r
Lab
2
Katalin Susztak, Upenn
Project
2
AMP
RFA
2
AMP2
biosample_term_name!
HepG2
hepatocyte
Showing 2 of 2 results
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Download
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP