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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
2
target gene predictions
Annotation Category
5
Gene expression levels
2
Target gene links
Annotation type Category
5
single cell RNA-seq
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
Available data
5
tsv
2
bed bed3+
File set status
7
released
Genome assembly (visualization)
2
hg19
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Biosample term
5
Afferent / Efferent Arteriole Endothelial Cell
1
coronary artery
1
smooth muscle cell of the coronary artery
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
454
epithelium
178
kidney
121
connective tissue
115
pancreas
68
vasculature
47
blood vessel
41
liver
36
musculature of body
32
intestine
20
brain
18
heart
18
lung
17
skin of body
14
large intestine
14
stomach
13
adrenal gland
10
mammary gland
10
pituitary gland
9
lymphatic vessel
8
embryo
7
artery
6
adipose tissue
6
blood
6
bodily fluid
6
esophagus
6
extraembryonic component
6
small intestine
4
bronchus
4
eye
4
thyroid gland
4
uterus
3
bone element
3
bone marrow
3
gonad
3
limb
3
ovary
3
placenta
3
prostate gland
2
thymus
2
vein
1
breast
1
lymph node
1
penis
1
spinal cord
1
spleen
Life stage
5
adult
Date released
5
September, 2023
2
May, 2021
Software used
3
r
2
abc
2
deseq2
Lab
AMP-T2D consortium
5
KPMP
2
Jesse Engreitz, Stanford University
Project
5
KPMP
2
AMP
RFA
5
KPMP
2
AMP
biosample_term_name!
cartilage tissue
lab.title!
AMP-T2D consortium
Showing 7 of 7 results
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Download
FileSet
DSR861QYC
released
Annotation file set
: Differential activity annotation of Afferent / Efferent Arteriole Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR411SMQ
released
Annotation file set
: Differential activity annotation of Afferent / Efferent Arteriole Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR066JCK
released
Annotation file set
: Gene expression annotation of Afferent / Efferent Arteriole Endothelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR048SNB
released
Annotation file set
: Gene expression annotation of Afferent / Efferent Arteriole Endothelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR895LIS
released
Annotation file set
: Gene expression annotation of Afferent / Efferent Arteriole Endothelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR886XYE
released
Annotation file set
: enhancer-gene predicton of coronary_artery_smooth_muscle_cell-Miller2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP