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Citing CMDGA
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Annotation type
2
gene expression
2
variant allelic effects
Annotation Category
2
Gene expression levels
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
2
snDropSeq
Available data
2
bed bed3+
2
tsv
2
txt
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
21
coronary artery
20
endothelial cell of umbilical vein
19
tibial artery
16
ascending aorta
16
endothelial cell of hepatic sinusoid
13
aorta
11
thoracic aorta
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
vascular associated smooth muscle cell
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
cardiac fibroblast
1
circle of Willis
1
placental villus capillary endothelial cell
1
whole blood
Organ
4
vasculature
Life stage
2
adult
Date released
2
February, 2021
2
February, 2024
Software used
2
deltasvm
2
r
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
biosample_term_name!
retina
Showing 4 of 4 results
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Download
FileSet
DSR612XXH
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Vascular Smooth Muscle Cells and pericytes from GSE121862 snDropSeq kidney regions (medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR033OJN
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Vascular Smooth Muscle Cells and pericytes from GSE121862 snDropSeq kidney regions (cortex)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR963XVP
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR265TNH
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP