Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
21
chromatin state
20
target gene predictions
13
eQTL
11
gene expression
2
Fine-mapped variants
2
accessible chromatin
2
binding sites
2
sQTL
2
variant to gene
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
3
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
extracellular matrix secreting cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
monocyte
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
regulatory T cell
1
CD4-positive helper T cell
1
T cell
1
basal cell
1
ciliated cell
1
club cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
erythrocyte
1
immature natural killer cell
1
left renal cortex interstitium
1
macrophage
1
medulla oblongata
1
midbrain
1
myeloid dendritic cell
1
myofibroblast cell
1
neuroendocrine cell
1
pericyte cell
1
plasma cell
1
plasmacytoid dendritic cell
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
type I pneumocyte
1
type II pneumocyte
0
A549
Organ
2
pancreas
Life stage
2
adult
Date released
2
May, 2020
Software used
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
software_used.software.name!
macs
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR941LPG
released
Annotation file set
: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 5 T2D samples with most significant peak selected.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR610XQN
released
Annotation file set
: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 38 non-diabetic samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP