Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
binding sites
1
eQTL
1
histone modifications
1
target gene predictions
1
variant allelic effects
0
candidate regulatory elements
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
cell line
Biosample term
40
heart
35
kidney
34
muscle of arm
32
stomach
31
brain
30
lung
29
muscle of leg
28
large intestine
28
muscle of back
27
placenta
26
left lung
26
small intestine
23
right lung
21
renal cortex interstitium
21
renal pelvis
21
right kidney
21
thymus
18
left kidney
18
monocyte
17
adrenal gland
16
spinal cord
15
neural progenitor cell
14
endothelial cell
14
fibroblast
13
excitatory neuron
12
foreskin keratinocyte
12
macrophage
11
B cell
11
CD4-positive, alpha-beta memory T cell
11
pericyte cell
11
retinal pigment epithelial cell
10
astrocyte
10
smooth muscle cell
10
trophoblast cell
8
EndoC_BH1
8
adipocyte
8
cardiac muscle cell
8
chorionic villus
8
endothelial cell of umbilical vein
8
foreskin fibroblast
8
muscle of trunk
8
retina
7
H9
7
T cell
7
T-helper 17 cell
7
common myeloid progenitor, CD34-positive
7
heart left ventricle
7
left renal cortex interstitium
7
left renal pelvis
7
liver
7
neurosphere
7
pancreatic ductal cell
7
regulatory T cell
7
right renal pelvis
6
CD8-positive, alpha-beta T cell
6
SGBS preadipocytes
6
embryonic stem cell
6
fibroblast of cardiac tissue
6
hepatocyte
6
osteoblast
6
pancreatic acinar cell
6
pancreatic beta cell
6
right renal cortex interstitium
6
spleen
5
SK-N-DZ
5
T-helper 1 cell
5
WI38
5
bronchial epithelial cell
5
chondrocyte
5
epithelial cell of prostate
5
erythroblast
5
eye
5
foreskin melanocyte
5
heart right ventricle
5
inhibitory neuron
5
keratinocyte
5
mesenchymal stem cell
5
pancreatic alpha cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
5
skin fibroblast
5
tongue
5
trophoblast
4
22Rv1
4
CD4-positive, alpha-beta T cell
4
HEK293
4
SK-N-SH
4
T-helper 2 cell
4
chorion membrane
4
choroid plexus epithelial cell
4
colon epithelial cell
4
endodermal cell
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
limb
4
memory B cell
4
mesodermal cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
natural killer cell
4
neural cell
4
neutrophil
4
pancreatic delta cell
4
renal cortical epithelial cell
4
skeletal muscle myoblast
4
testis
4
type II pneumocyte
3
CD1c-positive myeloid dendritic cell
3
CD8-positive, alpha-beta memory T cell
3
CMK
3
Daoy
3
GM06990
3
GM12864
3
GM12865
3
HUES6
3
HepG2
3
IMR-90
3
L1-S8
3
MG63
3
NAMALWA cell
3
PC-9
3
SJCRH30
3
SK-N-MC
3
WERI-Rb-1
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
brain microvascular endothelial cell
3
brain pericyte
3
cortical cell of adrenal gland
3
dermis blood vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of proximal tubule
3
fibroblast of lung
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
hematopoietic multipotent progenitor cell
3
iris pigment epithelial cell
3
kidney epithelial cell
3
left cardiac atrium
3
lung microvascular endothelial cell
3
mammary gland epithelial cell
3
mesendoderm
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuron
3
neuronal stem cell
3
non-pigmented ciliary epithelial cell
3
ovary
3
pancreatic stellate cell
3
psoas muscle
3
pulmonary artery endothelial cell
3
sigmoid colon
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
3
umbilical cord
2
cardiac fibroblast
2
A673
2
AG04449 cell
2
AG04450 cell
2
BE(2)-C
2
BJ cell
2
CD14-positive monocyte
2
CD4-positive helper T cell
2
DND-41
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM03348
2
GM08714
2
GM10248
2
GM10266
2
GM13976
2
GM13977
2
GM18507
2
GM20000
2
H1-hESC
2
H7-hESC
2
HUES48
2
HUES64
2
KOPT-K1
2
L1-S8R
2
Muller cell
2
NAMALWA
2
NT2-D1 cell
2
Panc1
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
RKO
2
Rh-4 cell
2
T follicular helper cell
2
T-cell
2
UCSF-4
Organ
2
limb
2
nerve
1
lung
Life stage
adult
Date released
2
June, 2020
1
November, 2019
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
adult
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR940ZJY
released
Annotation file set
: Accessible chromatin annotation for Neural Tibial Nerve from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR234KHJ
released
Annotation file set
: Accessible chromatin annotation of tibial nerve
Lab:
AMP-T2D consortium
Project:
AMP