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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
cell line
2
tissue
Biosample term
15
islet of Langerhans
8
liver
7
macrophage
6
endothelial cell of hepatic sinusoid
6
subcutaneous adipose tissue
5
adipose tissue
5
monocyte
4
fibroblast
4
foreskin fibroblast
4
mammary epithelial cell
3
T-cell acute lymphoblastic leukemia
3
blood cell
3
brain
3
endothelial cell
3
neuronal stem cell
3
osteoblast
3
prostate gland
3
putamen
3
regulatory T cell
3
skin of body
3
substantia nigra
2
T cell
2
Th1 cell
2
amygdala
2
anterior cingulate cortex
2
aortic adventitial fibroblast
2
articular chondrocyte
2
blood
2
bronchial epithelial cell
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
colon adenocarcinoma
2
coronary artery
2
cortex of kidney
2
endothelial cell of umbilical vein
2
erythroblast
2
erythroid progenitor cell
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
frontal cortex
2
hypothalamus
2
kidney
2
layer of hippocampus
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
mononuclear cell of bone marrow
2
myotube
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neuroblastoma cell line
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
pancreas
2
peripheral blood-derived erythroblast
2
placenta
2
renal epithelial cell
2
retina
2
retinal pigment epithelial cell
2
right atrium auricular region
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
spleen
2
testis
2
tibial artery
2
tibial nerve
2
tracheal epithelial cell
1
Adipose stromal cell
1
Ammon's horn
1
BICR 31
1
C1 segment of cervical spinal cord
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD8-Positive T-Lymphocytes
1
EAhy 926 cell
1
Ishikawa
1
Leydig cell
1
Rhabdoid Tumor of the Kidney
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
T-lymphoma cell line
1
Th17 cell
1
Th2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
adipose-derived stem cell
1
adrenal gland
1
aortic endothelial cell
1
aortic smooth muscle cell
1
ascending aorta
1
atypical teratoid rhabdoid tumor
1
body of pancreas
1
breast
1
breast carcinoma
1
caput epididymis
1
cardiac fibroblast
1
cardiac muscle cell
1
cardiac muscle myoblast
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
chronic lymphocytic leukemia cell
1
chronic myelomonocytic leukemia
1
colon
1
colon sigmoid
1
colorectal adenocarcinoma
1
colorectal cancer
1
columnar chondrocyte
1
cortex
1
dermis microvascular lymphatic vessel endothelial cell
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
embryonic stem cell
1
endometrial stromal cell
1
endometrial stromal tumor
1
endometrium
1
endometrium cancer
1
endothelial cell of coronary artery
1
epidermal stem cell
1
epididymis
1
epithelial cell of proximal tubule
1
erythroid cell
1
esophageal adenocarcinoma
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fallopian tube
1
fat cell
1
fibroblast of dermis
1
first pancreatic bud
1
foreskin keratinocyte
1
foreskin melanocyte
1
gastrocnemius medialis(Muscle - Skeletal)
1
head and neck squamous cell carcinoma
1
heart
1
heart left ventricle
1
helper T cell
1
hematopoietic multipotent progenitor cell
1
hematopoietic stem cell
1
hepatocyte
1
iPS DF 4.7 Cell Line
1
induced T-regulatory cell
1
keratinocyte
1
kidney epithelium
1
left ventricle myocardium
1
leukemic stem cell
1
lung
1
mammary gland
1
mast cell
1
mature neutrophil
1
medulloblastoma
1
mesendoderm
1
meso-epithelial cell
1
microglial cell
1
midbrain
1
minor salivary gland
1
mononuclear cell
1
myofibroblast cell
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neoplastic cell
1
nephron tubule
1
osteosarcoma
1
ovary
1
pancreatic ductal cell
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
pituitary gland
1
plasma cell
1
pre-B acute lymphoblastic leukemia cell
1
preadipocyte
1
prefrontal cortex
1
primordial germ cell
1
progenitor cell
1
prostate gland cancer cell
1
pulmonary artery endothelial cell
1
pulmonary interstitial fibroblast
1
renal connecting tubule
1
renal glomerulus
1
renal proximal tubule cell
1
respiratory system smooth muscle
1
right lobe of liver
1
sensory neuron
1
skin of forearm
1
skin of prepuce of penis
1
small cell ovarian carcinoma cell
1
small intestine
1
smooth muscle cell
1
somatic muscle myotube
1
spinal cord
1
stomach
Organ
2
kidney
Date released
1
August, 2021
1
February, 2021
Software used
1
macs
1
matrix-eQTL
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_type!
cell line
Showing 2 of 2 results
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP