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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
21
stomach
19
heart
17
lung
17
muscle of arm
16
kidney
15
muscle of back
14
adrenal gland
14
brain
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
small intestine
13
left lung
13
placenta
11
renal cortex interstitium
11
right lung
10
hematopoietic multipotent progenitor cell
10
renal pelvis
10
right kidney
spleen
10
thymus
9
breast cancer cell
9
left kidney
8
CD4-positive, alpha-beta T cell
8
foreskin keratinocyte
8
spinal cord
7
CD8-positive, alpha-beta T cell
7
cardiac muscle cell
7
foreskin fibroblast
7
liver
7
melanoma
6
H9
6
MCF-7
6
fibroblast cell line
6
heart left ventricle
6
mammary epithelial cell
5
B cell
5
CD4-positive, alpha-beta memory T cell
5
endothelial cell of umbilical vein
5
keratinocyte
5
neural progenitor cell
5
neuronal stem cell
5
peripheral blood mononuclear cell
5
prostate cancer cell line
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
5
testis
5
upper lobe of left lung
4
A549
4
CD14-positive monocyte
4
Peyer's patch
4
T-cell
4
WI38
4
body of pancreas
4
bronchial epithelial cell
4
chorionic villus
4
dermis blood vessel endothelial cell
4
esophagus squamous epithelium
4
foreskin melanocyte
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
glioblastoma multiforme cancer stem cell
4
layer of hippocampus
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
mesodermal cell
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neurosphere
4
ovary
4
pancreas
4
prostate gland
4
retina
4
right renal pelvis
4
thyroid gland
4
transverse colon
4
trophoblast cell
3
22Rv1
3
HEK293
3
LNCAP
3
MCF 10A
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
Tumor-derived cell line
3
acute myeloid leukemia
3
adipocyte
3
breast epithelium
3
cardiac fibroblast
3
dermal fibroblast
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
endocrine pancreas
3
endodermal cell
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
fibroblast of lung
3
heart right ventricle
3
liposarcoma
3
mesenchymal stem cell
3
natural killer cell
3
omental fat pad
3
osteoblast
3
parathyroid adenoma
3
psoas muscle
3
regulatory T cell
3
right renal cortex interstitium
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
synovial sarcoma cell
3
temporal lobe
3
tibial nerve
3
triple-negative breast cancer
3
trophoblast
2
AG10803
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
Daoy
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12801
2
GM12864
2
GM12865
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM13976
2
GM13977
2
GM20000
2
GM23248
2
HAP-1
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES64
2
HeLa-S3
2
HepG2
2
IMR-90
2
Ishikawa
2
Jurkat
2
K562
2
KBM-7
2
LHCN-M2
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NAMALWA
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
PC-9
2
RKO
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SJSA1
2
SK-MEL-5 cell
2
SK-N-DZ
2
SK-N-MC
2
SK-N-SH
2
SUM-185PE cell
2
SW480
2
T-helper 17 cell
2
T-helper 2 cell
2
T-lymphocyte
2
Th1 cell
2
WERI-Rb-1
2
adipose tissue
2
adult acute myeloid leukemia
2
angular gyrus
2
aorta
2
ascending aorta
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
cingulate gyrus
2
colon adenocarcinoma
2
colonic mucosa
2
diffuse large B-cell lymphoma
2
duodenal mucosa
2
ectodermal cell
2
endothelial cell
Organ
4
lung
Life stage
3
adult
Date released
18
September, 2022
4
February, 2021
1
October, 2022
Software used
3
encode-ccres
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
spleen
Showing 4 of 4 results
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Download
FileSet
DSR641NTB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A549
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR496BBN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A549
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885NAO
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A549
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378GKW
released
Annotation file set
: Binding sites annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP