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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
7
endothelial cell of umbilical vein
7
keratinocyte
6
endothelial cell of hepatic sinusoid
5
foreskin keratinocyte
5
mammary epithelial cell
5
mammary gland epithelial cell
4
bronchial epithelial cell
3
choroid plexus epithelial cell
3
dermis lymphatic vessel endothelial cell
3
epithelial cell of prostate
3
hepatocyte
3
retinal pigment epithelial cell
2
breast epithelium
2
dermis blood vessel endothelial cell
2
endothelial cell
2
epithelial cell of proximal tubule
2
esophagus squamous epithelium
2
kidney tubule cell
2
myoepithelial cell of mammary gland
2
pancreatic ductal cell
2
pulmonary artery endothelial cell
2
tracheal epithelial cell
1
aortic endothelial cell
1
brain microvascular endothelial cell
1
colon epithelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of coronary artery
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney epithelium
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
meso-epithelial cell
1
non-pigmented ciliary epithelial cell
1
renal connecting tubule
1
renal cortical epithelial cell
1
vein endothelial cell
0
A549
Organ
20
lung
3
epithelium
3
liver
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
1
February, 2021
Software used
2
chromhmm
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR642PKA
released
Annotation file set
: Chromatin states for BSS00556 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607QDA
released
Annotation file set
: Chromatin states for BSS00554 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687WXO
released
Annotation file set
: Binding sites annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP