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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
14
MCF-7
6
mammary gland epithelial cell
6
myoepithelial cell of mammary gland
5
T47D
4
mammary epithelial cell
3
MCF 10A
3
fibroblast of mammary gland
2
luminal epithelial cell of mammary gland
0
A549
Disease term
4
breast ductal adenocarcinoma
Organ
39
lung
5
mammary gland
Life stage
5
adult
Date released
4
September, 2022
1
February, 2021
Software used
2
chromhmm
2
r
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR606JCT
released
Annotation file set
: Candidate regulatory elements for BSS01705 T47D from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR045HHM
released
Annotation file set
: Candidate regulatory elements for BSS01699 T47D from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR763JIH
released
Annotation file set
: Chromatin states for BSS01705 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR990AAM
released
Annotation file set
: Chromatin states for BSS01699 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR037SAY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE T47D
Lab:
AMP-T2D consortium
Project:
AMP