Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
18
chromatin state
3
candidate regulatory elements
2
binding sites
1
accessible chromatin
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
89
monocyte
52
HeLa-S3
39
H1-hESC
35
CD8-positive, alpha-beta T cell
19
HFFc6
18
K562
17
neural progenitor cell
15
CD14-positive monocyte
11
breast cancer cell
10
pituitary stalk
9
gastric cancer cell
9
pericyte cell
8
GM12878
8
Rhabdomyosarcoma
8
endothelial cell
8
neuroblastoma cell
7
B-lymphoblastoid cell line
7
H9
7
HepG2
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
lymphocyte
6
Chondroid Chordoma
6
dendritic cell
6
fibroblast
6
hESC cell
6
hepatocyte
6
keratinocyte
6
liposarcoma
6
neuroblastoma cell line
6
olfactory receptor cell
6
smooth muscle cell
6
squamous cell lung carcinoma
5
CyT49
5
T-cell acute lymphoblastic leukemia
5
adipocyte
5
liver
5
macrophage
5
melanoma cell
5
osteosarcoma
5
pancreatic ductal cell
4
B cell
4
HUES8
4
Jurkat
4
astrocyte
4
iPSC derived cell line
4
mammary epithelial cell
4
natural killer cell
4
neuronal stem cell
4
pancreas
4
pancreatic acinar cell
4
pancreatic delta cell
4
psoas muscle
4
rhabdomyosarcoma cell
4
thymus
3
CD4-positive helper T cell
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
MCF-7
3
U937
3
acute myeloid leukemia
3
adrenal gland
3
brain
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
esophageal squamous cell carcinoma
3
fibroblast of cardiac tissue
3
foreskin fibroblast
3
glioblastoma cell
3
glioma cell
3
heart left ventricle
3
lymphoblast
3
lymphoblastoid cell line
3
mesenchymal stem cell
3
mesendoderm
3
osteoblast
3
pancreatic A cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal adenocarcinoma
3
placenta
3
stomach
3
trophoblast cell
3
type B pancreatic cell
2
A549
2
B-lymphocyte
2
BJAB cell
2
COLO205
2
EndoC_BH1
2
GM18505
2
GM18507
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HCT-116 cell
2
HCT116
2
HS-SY-2 cell
2
HT-29
2
IMR-90
2
KARPAS-422 cell
2
LNCAP
2
LoVo cell
2
MCF 10A cell
2
MDA-MB-231 cell
2
MM.1S
2
Mantle cell lymphoma
2
NCCIT cell
2
OCI-LY7
2
PC-9
2
RS4-11 cell
2
Rh-4 cell
2
T-cell
2
THP-1
2
Th1 cell
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
adipose tissue
2
aorta
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
cortical cell of adrenal gland
2
endometriosis
2
endothelial cell of umbilical vein
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
epithelial ovarian cancer cell
2
erythroblast
2
erythroid progenitor cell
2
esophageal carcinoma
2
fibroblast cell line
2
gabaergic neuron
2
glioblastoma multiforme cancer stem cell
2
glutamatergic neuron
2
heart
2
heart right ventricle
2
hematopoietic cell
2
hepatic stellate cell
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
islet of Langerhans
2
kidney
2
large intestine
2
leukemic stem cell
2
luminal epithelial cell of mammary gland
2
lymphocyte of B lineage (iPSC)
2
mammary gland epithelial cell
2
mantle cell lymphoma cell
2
mast cell
2
medulloblastoma cell line
2
megakaryocyte
2
memory B cell
2
metastatic melanoma
2
multiple myeloma cell line
2
myotube
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
ovary
2
pancreatic cell line
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
prostate gland
2
regulatory T cell
2
sigmoid colon
2
skeletal muscle myoblast
2
skin fibroblast
2
small intestine
2
smooth muscle cell of the coronary artery
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
synovial sarcoma cell
2
tracheal epithelial cell
2
triple-negative breast cancer
2
type II pneumocyte
2
umbilical cord mesenchymal stem cell line cell
2
urinary bladder cancer cell
1
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A673
Organ
2
lung
Date released
1
February, 2021
1
May, 2021
Software used
r
1
abc
1
macs
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
biosample_term_name!
upper lobe of left lung
software_used.software.name!
r
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR761KYR
released
Annotation file set
: Histone modifications annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR510YWQ
released
Annotation file set
: enhancer-gene predicton of A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP