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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
83
heart
70
brain
67
muscle of arm
65
kidney
63
stomach
61
lung
59
placenta
58
muscle of leg
56
large intestine
54
muscle of back
54
small intestine
53
HeLa-S3
52
left lung
48
thymus
46
H1-hESC
45
right lung
43
neural progenitor cell
41
right kidney
40
renal cortex interstitium
40
renal pelvis
36
adrenal gland
36
left kidney
34
spinal cord
30
CD8-positive, alpha-beta T cell
29
endothelial cell
28
fibroblast
24
monocyte
23
CD4-positive, alpha-beta memory T cell
23
smooth muscle cell
23
trophoblast cell
22
K562
22
adipocyte
22
foreskin keratinocyte
22
pericyte cell
21
keratinocyte
21
liver
21
macrophage
20
breast cancer cell
19
B cell
19
CD14-positive monocyte
19
HFFc6
19
foreskin fibroblast
19
hepatocyte
18
endothelial cell of umbilical vein
18
heart left ventricle
17
cardiac muscle cell
17
muscle of trunk
17
retina
H9
16
chorionic villus
16
embryonic stem cell
16
retinal pigment epithelial cell
15
HepG2
15
astrocyte
14
mesenchymal stem cell
14
pancreatic ductal cell
13
T-helper 17 cell
13
bronchial epithelial cell
13
fibroblast of cardiac tissue
13
heart right ventricle
13
islet of Langerhans
13
neurosphere
13
osteoblast
12
EndoC_BH1
12
T cell
12
common myeloid progenitor, CD34-positive
12
excitatory neuron
12
neuroblastoma cell
12
spleen
11
GM12878
11
epithelial cell of prostate
11
erythroblast
11
fibroblast of lung
11
left renal cortex interstitium
11
left renal pelvis
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
neuronal stem cell
10
pancreatic acinar cell
10
regulatory T cell
10
skeletal muscle myoblast
10
skin fibroblast
10
trophoblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
mammary epithelial cell
9
mammary gland epithelial cell
9
neutrophil
9
right renal cortex interstitium
9
tongue
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
NAMALWA cell
8
colon epithelial cell
8
endodermal cell
8
fibroblast cell line
8
fibroblast of dermis
8
limb
8
mesendoderm
8
pituitary stalk
8
skeletal muscle fiber
7
AG04449 cell
7
AG04450 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta memory T cell
7
CMK
7
Jurkat
7
MCF-7
7
MG63
7
PC-9
7
SK-N-MC
7
WERI-Rb-1
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
esophageal adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
hematopoietic multipotent progenitor cell
7
pancreatic beta cell
7
skeletal muscle satellite cell
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HUES6
6
HUES8
6
NT2-D1 cell
6
WI38
6
chondrocyte
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
hESC cell
6
mesodermal cell
6
natural killer cell
6
neuroblastoma cell line
6
ovary
6
pancreas
6
pancreatic delta cell
6
psoas muscle
6
skeletal muscle tissue
6
testis
6
type I muscle cell
5
A549
5
A673
5
CD4-positive helper T cell
5
CyT49
5
Ewing sarcoma
5
GM19240
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
KARPAS-422 cell
5
L1-S8
5
SGBS preadipocytes
5
T-helper 1 cell
5
acute myeloid leukemia
5
adipose tissue
5
enterocyte
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
lymphoblastoid cell line
5
neural cell
5
non-pigmented ciliary epithelial cell
5
osteosarcoma
5
pancreatic alpha cell
5
prostate cancer cell line
5
pulmonary artery endothelial cell
5
renal cortical epithelial cell
5
sigmoid colon
5
skeletal muscle cell
5
umbilical cord
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
COLO205
4
Caco-2 cell
4
DND-41
4
EH
4
EL
4
ELF-1
4
ELR
Organ
5
lung
Life stage
adult
Date released
2
February, 2021
1
June, 2020
1
May, 2021
1
October, 2022
Software used
3
macs
1
abc
1
chromhmm
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
biosample_term_name!
H9
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR259UTD
released
Annotation file set
: Binding sites annotation for A549 (A549) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761KYR
released
Annotation file set
: Histone modifications annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378GKW
released
Annotation file set
: Binding sites annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR510YWQ
released
Annotation file set
: enhancer-gene predicton of A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP