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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
ChIP-seq
40
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
51
HeLa-S3
46
H1-hESC
41
monocyte
39
islet of Langerhans
38
endothelial cell
29
macrophage
28
fibroblast
26
retina
24
hepatocyte
21
EndoC_BH1
21
smooth muscle cell
20
pancreatic ductal cell
20
pigmented layer of retina
19
HFFc6
19
kidney
19
pericyte cell
18
epithelial cell of proximal tubule
18
neural progenitor cell
18
pancreatic beta cell
18
subcutaneous adipose tissue
17
K562
17
glomerular endothelial cell
17
pancreatic alpha cell
16
induced pluripotent stem cell
16
liver
16
pancreatic acinar cell
16
pancreatic delta cell
15
regulatory T cell
14
excitatory neuron
12
coronary artery
12
right atrium auricular region
12
tibial nerve
11
B cell
11
CD8-positive, alpha-beta T cell
11
T cell
11
T-helper 1 cell
11
adipose tissue
11
astrocyte
11
cardiomyocytes
11
heart
11
tibial artery
10
T-helper 17 cell
10
endothelial cell of hepatic sinusoid
10
frontal cortex
10
pancreatic stellate cell
10
putamen
9
adipocyte
9
caudate nucleus
9
extended pluripotent stem (EPS) cells
9
glomerular visceral epithelial cell
9
heart left ventricle
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
omental fat pad
9
pancreas
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
9
skeletal muscle fiber
8
Ammon's horn
8
cardiomyocytes (cardiac muscle cell)
8
cerebellum
8
embryonic stem cell
8
glutamatergic neuron
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
natural killer cell
8
skeletal muscle satellite cell
7
GM12878
7
ascending aorta
7
body of pancreas
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphoblastoid cell line
7
mesangial cell
7
mesenchymal stem cell
7
osteoblast
7
substantia nigra
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
H9
6
SGBS preadipocytes
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
brain
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
erythroblast
6
gamma-delta T cell
6
hypothalamus
6
iPSC derived cell line
6
lymphocyte
6
naive B cell
6
nucleus accumbens
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
central memory CD8-positive, alpha-beta T cell
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of cardiac tissue
5
gabaergic neuron
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart right ventricle
5
hepatic stellate cell
5
inhibitory neuron
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
neutrophil
5
pancreatic endothelial cell
5
right lobe of liver
5
spleen
5
stomach
4
CD4-positive helper T cell
4
CD4-positive, alpha-beta T cell
4
CyT49
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
Schwann cell
4
activated CD4-positive, alpha-beta T cell
4
adrenal gland
4
adult endothelial progenitor cell
4
blood vessel smooth muscle cell
4
bone tissue
4
cardiac muscle cell
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of lymphatic vessel
4
endothelial cell of umbilical vein
4
enteric smooth muscle cell
4
kidney connecting tubule epithelial cell
4
kidney glomerular epithelial cell
4
leukocyte
4
luminal epithelial cell of mammary gland
Organ
1
lung
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
lab.title!
Jesse Engreitz, Stanford University
annotation_type_category!
ChIP-seq
Showing 1 of 1 results
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Download
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP