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Schema
Citing CMDGA
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Annotation type
5
candidate regulatory elements
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
muscle of back
14
adrenal gland
14
large intestine
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
common myeloid progenitor, CD34-positive
10
renal pelvis
10
right kidney
9
left kidney
9
spleen
9
thymus
8
hematopoietic multipotent progenitor cell
7
foreskin keratinocyte
7
spinal cord
6
CD8-positive, alpha-beta T cell
6
H9
6
heart left ventricle
6
liver
5
B cell
5
CD4-positive, alpha-beta T cell
5
foreskin fibroblast
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
MCF-7
4
Peyer's patch
4
body of pancreas
4
chorionic villus
4
dermis blood vessel endothelial cell
4
endothelial cell of umbilical vein
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
neurosphere
4
ovary
4
peripheral blood mononuclear cell
4
right renal pelvis
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast cell
4
upper lobe of left lung
3
A549
3
CD14-positive monocyte
3
MCF 10A
3
breast epithelium
3
cardiac muscle cell
3
endocrine pancreas
3
esophagus muscularis mucosa
3
foreskin melanocyte
3
heart right ventricle
3
layer of hippocampus
3
mesodermal cell
3
natural killer cell
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
AG10803
2
HEK293
2
HeLa-S3
2
LNCAP
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
T-cell
2
T-helper 1 cell
2
angular gyrus
2
aorta
2
ascending aorta
2
cardiac fibroblast
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
eye
2
fibroblast of breast
2
fibroblast of lung
2
mammary epithelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neural cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
placental basal plate
2
prostate gland
2
skeletal muscle tissue
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
uterus
2
vagina
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
BE2C
1
BJ
1
C4-2B
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM04503
1
GM04504
1
GM12878
1
GM20000
1
GM23248
1
GM23338
1
H1
1
H4
1
H54
1
H7
1
HAP-1
1
HCT116
1
HFF-Myc
1
HL-60
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
1
Ishikawa
1
Jurkat, Clone E6-1
1
K562
1
KBM-7
1
KMS-11
1
Karpas-422
1
LHCN-M2
1
LNCaP clone FGC
1
LoVo
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
RCC
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SK-N-MC
1
SU-DHL-6
Life stage
5
adult
unknown
Date released
4
February, 2021
1
February, 2024
Software used
6
r
5
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
relevant_life_stage!
unknown
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR795LWH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR821WTF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR417HOY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR850MEX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LBA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP