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Citing CMDGA
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Annotation type
8
accessible chromatin
6
candidate regulatory elements
2
gene expression
2
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
H3K27ac ChIP-Seq
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
9
pericyte cell
7
endothelial cell
6
GM12878
6
H9
6
lymphocyte
6
olfactory receptor cell
6
smooth muscle cell
4
CyT49
4
HUES8
4
fibroblast
4
iPSC derived cell line
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
macrophage
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
psoas muscle
2
HCT116
2
activated CD4-positive, alpha-beta T cell
2
aorta
2
astrocyte
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
enteric smooth muscle cell
2
gabaergic neuron
2
glutamatergic neuron
2
heart left ventricle
2
heart right ventricle
2
keratinocyte
2
liver
2
luminal epithelial cell of mammary gland
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreas
2
pancreatic A cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
smooth muscle cell of the esophagus
2
thymus
2
type B pancreatic cell
2
type II pneumocyte
1
Ammon's horn
1
B cell
1
B-lymphoblastoid cell line
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
bladder (urinary bladder)
1
cardiac endothelial cell
1
cardiac precursors (cardiac muscle cell)
1
cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
dorsolateral prefrontal cortex
1
eccrine cell
1
embryonic stem cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
erythroblast
1
esophagus
1
fat cell
1
fibroblast cell line
1
fibroblast of cardiac tissue
1
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
granular cell of epidermis
1
heart
1
hepatocyte
1
inflammatory macrophage
1
intestinal tuft cell
1
islet of Langerhans
1
lung
1
luteal cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
mesenchymal stem cell
1
mesendoderm
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
neural progenitor cell
1
neutrophil
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
ovary
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
regulatory T cell
1
respiratory goblet cell
1
right cardiac atrium
1
schwann cell
1
sigmoid colon
1
skeletal muscle fibroblast
1
skeletal muscle satellite cell
1
skin fibroblast
1
small intestine
1
small intestine goblet cell
1
spleen
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
trophoblast
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
undifferentiated ESC (H9 cell line)
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
white adipose cell
Date released
September, 2022
1
May, 2020
Software used
1
chicago
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
H3K27ac ChIP-Seq
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR608ZFL
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of B cell
Lab:
AMP-T2D consortium
Project:
AMP