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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
primary cell
4
in vitro differentiated cells
Biosample term
66
heart
66
stomach
56
kidney
52
brain
51
lung
50
muscle of arm
47
adrenal gland
47
small intestine
45
placenta
44
A549
43
large intestine
42
muscle of leg
41
muscle of back
39
left lung
39
liver
37
islet of Langerhans
37
thymus
35
retina
34
right lung
33
hematopoietic multipotent progenitor cell
31
right kidney
30
renal cortex interstitium
30
renal pelvis
27
left kidney
27
spinal cord
25
spleen
24
adipose tissue
23
neural progenitor cell
22
EndoC_BH1
21
MCF-7
21
heart left ventricle
20
breast cancer cell
20
pigmented layer of retina
19
K562
19
adipocyte
17
embryonic stem cell
17
sigmoid colon
16
H1-hESC
16
induced pluripotent stem cell
16
ovary
15
body of pancreas
15
psoas muscle
14
gastrocnemius medialis
14
pancreas
14
tibial nerve
14
transverse colon
13
heart right ventricle
13
skeletal muscle tissue
13
subcutaneous adipose tissue
13
testis
13
thyroid gland
13
upper lobe of left lung
12
layer of hippocampus
12
muscle of trunk
12
neuroblastoma cell
11
HepG2
11
Peyer's patch
11
caudate nucleus
11
chorionic villus
10
HeLa-S3
10
Rhabdomyosarcoma
10
endocrine pancreas
10
gastric cancer cell
10
progenitor cell of endocrine pancreas
10
prostate gland
9
GM12878
9
H9
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
mesenchymal stem cell
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
aorta
8
breast epithelium
8
cardiac muscle cell
8
coronary artery
8
fibroblast cell line
8
left renal cortex interstitium
8
omental fat pad
8
pituitary stalk
8
right atrium auricular region
8
right renal pelvis
8
temporal lobe
8
trophoblast
7
GM06990
7
GM12864
7
GM12865
7
HAP-1
7
HL-60
7
HT-29
7
Jurkat
7
KARPAS-422 cell
7
MM.1S
7
NAMALWA cell
7
OCI-LY7
7
PC-9
7
SK-N-MC
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
left renal pelvis
7
lower leg skin
7
mesendoderm
7
neuronal stem cell
7
substantia nigra
7
tibial artery
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19240
6
GM23248
6
LHCN-M2
6
LNCAP
6
LoVo cell
6
MG63
6
NT2-D1 cell
6
PC-3
6
RWPE1
6
Rh-4 cell
6
SGBS preadipocytes
6
SK-N-DZ
6
SK-N-SH
6
SW480
6
cardiac precursors (cardiac muscle cell)
6
cerebellum
6
chondrocyte
6
cingulate gyrus
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
hESC cell
6
immortal human breast epithelial cell line cell
6
neuroblastoma cell line
6
occipital lobe
6
parathyroid adenoma
6
right renal cortex interstitium
6
thoracic aorta
6
tongue
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM10248
5
GM10266
5
GM12891
5
GM12892
5
GM19238
5
GM19239
5
H7-hESC
5
HCT-116 cell
5
HUES6
5
HuH-7
5
KBM-7
5
LNCaP clone FGC
5
OCI-LY1
5
RPMI8226
5
SJSA1
5
T-cell acute lymphoblastic leukemia
5
WERI-Rb-1
5
WI38
5
ascending aorta
5
chorion membrane
5
endodermal cell
5
frontal cortex
5
limb
5
lymphoblastoid cell line
5
mucosa of rectum
5
osteosarcoma
5
prostate cancer cell line
5
putamen
5
urinary bladder
4
A172
4
A673
4
ACHN
4
B cell
4
Brodmann (1909) area 46
4
COLO205
4
Caki2
4
GM04503
4
GM04504
4
GM12873
4
GM18507
4
H4
4
HAC cell
4
HBMEC cell
4
HK-2 cell
Date released
2
February, 2021
2
June, 2020
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
biosample_type!
primary cell
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR801NZA
released
Annotation file set
: Histone modifications annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759UOG
released
Annotation file set
: Histone modifications annotation for Blood B-cell_BRACKETLCD19+BRACKETR from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR924GPB
released
Annotation file set
: Accessible chromatin annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR006MLI
released
Annotation file set
: Accessible chromatin annotation for Blood B-cell (CD19+) from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP