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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
chromatin state
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
9
pancreatic ductal cell
8
pancreatic acinar cell
7
pancreatic alpha cell
7
pancreatic beta cell
7
pancreatic delta cell
7
pancreatic stellate cell
6
dendritic cell
6
fibroblast
5
adipocyte
5
pancreatic endothelial cell
4
macrophage
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
3
Schwann cell
3
endothelial cell
3
enterocyte
3
liver
3
myofibroblast cell
3
pancreatic quiescent stellate cell
2
BJAB cell
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
Jurkat
2
MCF 10A cell
2
T cell
2
T-cell
2
THP-1
2
U937
2
adrenal gland
2
basal cell
2
cardiac muscle cell
2
epithelial cell of esophagus
2
goblet cell
2
hepatocyte
2
keratinocyte
2
pancreatic A cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle fiber
2
smooth muscle cell
2
stomach
2
subcutaneous adipose tissue
2
trophoblast cell
2
type B pancreatic cell
2
vascular associated smooth muscle cell
1
A549
1
A673
1
B cell
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Pancreatic islets
1
SK-N-SH
1
Satellite Cells, Skeletal Muscle
1
adipose tissue
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
bronchial goblet cell
1
cardiac ventricle
1
cell
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
erythroblast
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastrocnemius medialis
1
granulosa cell
1
iPS DF 19.11
1
induced pluripotent stem cell
1
islet of Langerhans
1
large intestine
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal stem cell
1
mesendoderm
1
mesothelial cell
1
monocyte
1
muscle of leg
1
muscle of trunk
1
myotube
1
natural killer cell
1
neuronal stem cell
1
osteoblast
1
ovary
1
pancreas
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endocrine cell
1
pancreatic immune cell
1
parietal cell
1
peptic cell
1
placenta
1
psoas muscle
1
sigmoid colon
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
thymus
1
thyroid follicular cell
1
thyroid gland
1
tissue-resident macrophage
1
transverse colon
1
type II pneumocyte
1
uterus
1
white adipose tissue
Date released
2
May, 2021
Software used
2
abc
Lab
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
3
AMP2
3
ENCODE3
2
AMP
1
LungMap2
annotation_type!
chromatin state
lab.title!
AMP-T2D consortium
Showing 2 of 2 results
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Download
FileSet
DSR474NZP
released
Annotation file set
: enhancer-gene predicton of skeletal_muscle_myoblast-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR143KXJ
released
Annotation file set
: enhancer-gene predicton of B_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP