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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
primary cell
2
in vitro differentiated cells
Biosample term
89
heart
85
stomach
79
kidney
70
brain
68
lung
67
muscle of arm
64
HeLa-S3
63
small intestine
62
adrenal gland
61
A549
58
muscle of leg
58
placenta
55
large intestine
54
muscle of back
53
H1-hESC
52
left lung
47
liver
47
thymus
45
right lung
43
islet of Langerhans
42
hematopoietic multipotent progenitor cell
42
right kidney
40
K562
40
renal cortex interstitium
40
renal pelvis
39
retina
36
left kidney
35
neural progenitor cell
34
spinal cord
34
spleen
33
heart left ventricle
31
adipose tissue
25
tibial nerve
24
MCF-7
24
body of pancreas
23
sigmoid colon
22
EndoC_BH1
22
adipocyte
21
caudate nucleus
21
pancreas
21
subcutaneous adipose tissue
20
coronary artery
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
HFFc6
19
heart right ventricle
right atrium auricular region
18
gastrocnemius medialis
18
thyroid gland
18
tibial artery
18
transverse colon
17
muscle of trunk
17
omental fat pad
17
substantia nigra
16
H9
16
ascending aorta
16
chorionic villus
16
induced pluripotent stem cell
16
testis
15
GM12878
15
embryonic stem cell
15
frontal cortex
15
skeletal muscle tissue
15
upper lobe of left lung
14
Peyer's patch
14
cerebellum
14
endocrine pancreas
14
layer of hippocampus
13
aorta
13
putamen
12
Ammon's horn
12
HepG2
12
left renal cortex interstitium
12
prostate gland
12
temporal lobe
11
breast epithelium
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
10
SK-N-SH
10
cardiomyocytes
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
mesenchymal stem cell
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
22Rv1
9
SK-N-DZ
9
angular gyrus
9
breast cancer cell
9
cardiac muscle cell
9
colonic mucosa
9
esophagus
9
parathyroid adenoma
9
progenitor cell of endocrine pancreas
9
tongue
9
vagina
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
lymphoblastoid cell line
8
lymphocyte
8
pituitary stalk
7
GM06990
7
GM12864
7
GM12865
7
GM19240
7
HAP-1
7
HL-60
7
HT-29
7
KARPAS-422 cell
7
LNCaP clone FGC
7
MM.1S
7
OCI-LY7
7
PC-9
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
WI38
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast cell line
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CMK
6
Caco-2 cell
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12875
6
GM19238
6
GM19239
6
GM23248
6
HCT116
6
HUES6
6
HUES8
6
KBM-7
6
LHCN-M2
6
LoVo cell
6
MG63
6
NT2-D1 cell
6
PC-3
6
RPMI8226
6
RWPE1
6
SGBS preadipocytes
6
SJSA1
6
SW480
6
amygdala
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
endodermal cell
6
globus pallidus
6
iPSC derived cell line
6
mesendoderm
6
middle frontal gyrus
6
mucosa of rectum
6
pancreatic ductal cell
6
urinary bladder
5
A172
5
A673
5
ACHN
5
C1 segment of cervical spinal cord
5
Caki2
5
GM04503
5
GM04504
5
GM12891
5
GM12892
5
GM18507
5
H4
5
H7-hESC
5
HUES64
5
HuH-7
5
Jurkat
5
L1-S8
5
LNCAP
5
M059J
5
NB4
5
OCI-LY1
5
OCI-LY3
5
Panc1
Date released
2
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
right atrium auricular region
biosample_type!
primary cell
annotation_type!
histone modifications
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR924GPB
released
Annotation file set
: Accessible chromatin annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR006MLI
released
Annotation file set
: Accessible chromatin annotation for Blood B-cell (CD19+) from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP