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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
primary cell
4
in vitro differentiated cells
Biosample term
89
heart
86
stomach
80
kidney
72
brain
68
lung
67
muscle of arm
63
HeLa-S3
63
small intestine
62
adrenal gland
60
A549
59
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
H1-hESC
52
left lung
48
liver
47
thymus
46
neural progenitor cell
45
right lung
42
hematopoietic multipotent progenitor cell
42
islet of Langerhans
42
right kidney
40
renal cortex interstitium
40
renal pelvis
39
K562
39
retina
36
left kidney
34
heart left ventricle
33
spinal cord
33
spleen
31
adipose tissue
25
tibial nerve
24
body of pancreas
23
MCF-7
23
sigmoid colon
22
EndoC_BH1
22
adipocyte
22
caudate nucleus
21
coronary artery
21
pancreas
21
subcutaneous adipose tissue
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
HFFc6
19
heart right ventricle
19
right atrium auricular region
18
gastrocnemius medialis
18
substantia nigra
18
thyroid gland
18
tibial artery
18
transverse colon
17
muscle of trunk
17
omental fat pad
16
H9
16
ascending aorta
16
chorionic villus
16
induced pluripotent stem cell
16
skeletal muscle tissue
16
testis
15
cerebellum
15
frontal cortex
15
layer of hippocampus
14
GM12878
14
HepG2
14
Peyer's patch
14
endocrine pancreas
14
putamen
14
upper lobe of left lung
13
aorta
13
embryonic stem cell
13
temporal lobe
12
Ammon's horn
12
left renal cortex interstitium
11
breast cancer cell
11
breast epithelium
11
left cardiac atrium
11
left renal pelvis
11
mesenchymal stem cell
11
prostate gland
11
right renal pelvis
10
SK-N-DZ
10
cardiomyocytes
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
lymphoblastoid cell line
10
lymphocyte
10
right renal cortex interstitium
10
thoracic aorta
9
22Rv1
9
Rhabdomyosarcoma
9
SK-N-SH
9
angular gyrus
9
cardiac muscle cell
9
colonic mucosa
9
duodenal mucosa
9
esophagus
9
parathyroid adenoma
9
progenitor cell of endocrine pancreas
9
tongue
9
trophoblast
9
vagina
8
NAMALWA cell
8
chorion membrane
8
cingulate gyrus
8
gastric cancer cell
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
pituitary stalk
7
B-lymphoblastoid cell line
7
HAP-1
7
HEK293
7
HT-29
7
IMR-90
7
KARPAS-422 cell
7
LNCaP clone FGC
7
MM.1S
7
OCI-LY7
7
PC-9
7
T47D
7
WI38
7
amygdala
7
cardiomyocytes (cardiac muscle cell)
7
diffuse intrinsic pontine glioma
7
endodermal cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
mesendoderm
7
neuroblastoma cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
CMK
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
GM12865
6
GM18507
6
GM19240
6
GM23248
6
H7-hESC
6
HCT116
6
HL-60
6
LHCN-M2
6
LoVo cell
6
MG63
6
PC-3
6
RPMI8226
6
RWPE1
6
SGBS preadipocytes
6
SK-N-MC
6
SW480
6
WERI-Rb-1
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
hypothalamus
6
middle frontal gyrus
6
mucosa of rectum
6
nucleus accumbens
6
occipital lobe
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
ACHN
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
BE(2)-C
5
BJ cell
5
C1 segment of cervical spinal cord
5
Caco-2 cell
5
Caki2
5
CyT49
5
Daoy
5
GM04503
5
GM04504
5
GM10248
5
GM10266
5
GM12875
5
GM19238
5
GM19239
5
H4
5
HUES6
5
HUES8
5
HuH-7
5
Jurkat
5
KBM-7
5
L1-S8
5
LNCAP
5
M059J
5
NT2-D1 cell
Date released
2
February, 2021
2
June, 2020
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
binding sites
biosample_type!
primary cell
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR801NZA
released
Annotation file set
: Histone modifications annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759UOG
released
Annotation file set
: Histone modifications annotation for Blood B-cell_BRACKETLCD19+BRACKETR from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR924GPB
released
Annotation file set
: Accessible chromatin annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR006MLI
released
Annotation file set
: Accessible chromatin annotation for Blood B-cell (CD19+) from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP