Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
candidate regulatory elements
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
2
bed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
11
CD4-positive, alpha-beta memory T cell
7
common myeloid progenitor, CD34-positive
5
T-helper 17 cell
5
WI38
4
22Rv1
4
bronchial epithelial cell
4
epithelial cell of prostate
4
neutrophil
4
osteoblast
3
B cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta memory T cell
3
aortic endothelial cell
3
fibroblast of lung
3
keratinocyte
3
lung microvascular endothelial cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
skeletal muscle myoblast
3
skeletal muscle tissue
2
CD14-positive monocyte
2
CD1c-positive myeloid dendritic cell
2
GM06990
2
GM12864
2
GM12865
2
KOPT-K1
2
L1-S8
2
PC-9
2
Panc1
2
T-cell
2
T-helper 1 cell
2
T-helper 2 cell
2
adipocyte
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of dermis
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular endothelial cell
2
hematopoietic multipotent progenitor cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
mononuclear cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
regulatory T cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
1
cardiac fibroblast
1
BL-2 cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
CWRU1
1
DG-75 cell
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12873
1
GM12874
1
GM12875
1
GM12891
1
GM12892
1
GM13976
1
GM13977
1
HCEC 1CT
1
HK-2
1
HK-2 cell
1
JVM-2 cell
1
KARPAS-422 cell
1
L1-S8R
1
NCI-H460
1
NCI-H460 cell
1
NT2-D1 cell
1
NT2/D1
1
RKO
1
SUDHL5
1
T cell
1
U-266 cell
1
Z-138
1
adipose tissue
1
amniotic epithelial cell
1
brain pericyte
1
cardiac fibroblast
1
chorion membrane
1
colon carcinoma
1
colon epithelial cell
1
effector memory CD4-positive, alpha-beta T cell
1
endocrine pancreas
1
endothelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
excitatory neuron
1
fibroblast of cardiac tissue
1
germinal center
1
hepatocyte
1
hippocampal neuron
1
leukocyte
1
lower motor neuron
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mesenchymal stem cell
1
myotube
1
naive T cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pericyte cell
1
regular cardiac myocyte
1
skeletal muscle satellite cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Life stage
11
adult
3
unknown
Date released
2
September, 2022
1
February, 2021
Software used
r
2
chromhmm
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
software_used.software.name!
r
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR241XSD
released
Annotation file set
: Chromatin states for BSS01345 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR484SNH
released
Annotation file set
: Chromatin states for BSS00093 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838SUF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP