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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
105
monocyte
32
CD8-positive, alpha-beta T cell
30
neural progenitor cell
25
retina
20
breast cancer cell
20
pigmented layer of retina
13
kidney
12
hepatocyte
12
neuroblastoma cell
11
embryonic stem cell
11
gastric cancer cell
10
EndoC_BH1
10
Rhabdomyosarcoma
10
diffuse intrinsic pontine glioma
10
endothelial cell of hepatic sinusoid
10
pancreatic ductal cell
10
retinal pigment epithelial cell
9
endothelial cell
9
liposarcoma
8
HepG2
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
fibroblast cell line
8
neuroblastoma cell line
8
osteoblast
7
B-lymphoblastoid cell line
7
acute myeloid leukemia
7
adipocyte
7
chondrocyte
7
hESC cell
7
heart
7
keratinocyte
7
liver
7
mammary epithelial cell
7
neuronal stem cell
7
pancreas
6
Chondroid Chordoma
6
Rh-4 cell
6
SGBS preadipocytes
6
brain
6
cardiac muscle cell
6
glioblastoma multiforme cancer stem cell
6
islet of Langerhans
6
lymphoblastoid cell line
6
melanoma
6
osteosarcoma
6
pancreatic beta cell
5
Ewing sarcoma
5
Jurkat
5
MCF-7
5
RS4-11 cell
5
Th1 cell
5
bronchial epithelial cell
5
dermal fibroblast
5
diffuse large B-cell lymphoma
5
esophageal squamous cell carcinoma
5
fibroblast
5
fibroblast of cardiac tissue
5
foreskin fibroblast
5
hepatic stellate cell
5
macrophage
5
mesenchymal stem cell
5
pancreatic acinar cell
5
pancreatic alpha cell
5
prostate cancer cell line
5
regulatory T cell
4
B cell
4
B-lymphocyte
4
COLO205
4
HS-SY-2 cell
4
Mantle cell lymphoma
4
Tumor-derived cell line
4
acute myeloid leukemia cell
4
adipose-derived stem cell
4
aortic endothelial cell
4
choroid plexus epithelial cell
4
colon adenocarcinoma
4
erythroid cell
4
erythroid progenitor cell
4
glioblastoma cell
4
glioma cell
4
glutamatergic neuron
4
heart left ventricle
4
immortal neural cell line cell
4
leukemic stem cell
4
lung fibroblast cell line
4
melanoma cell
4
natural killer cell
4
pancreatic cell line
4
pancreatic delta cell
4
pancreatic stellate cell
4
preadipocyte
4
prostate gland
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
3
cardiac fibroblast
3
786-O cell
3
A-673 cell
3
A549
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
Caco-2 cell
3
D341 Med cell
3
G-401 cell
3
GM06990
3
GM12864
3
GM12865
3
GM12878
3
GM19240
3
GM23248
3
H1-hESC
3
HAC cell
3
HAP-1
3
HBMEC cell
3
HCT-116 cell
3
HEK293
3
HL-60
3
HT-29
3
HeLa cell
3
HuH-7
3
IMR-90
3
Ishikawa
3
K562
3
KARPAS-422 cell
3
Kasumi-1
3
LHCN-M2
3
LNCAP
3
LoVo cell
3
MDA-MB-231 cell
3
MG63
3
MM.1S
3
MOLM-13 cell
3
Myoblasts
3
NAMALWA cell
3
NB-4 cell
3
NCCIT cell
3
NHBE cell
3
NHDF cell
3
NHEK
3
NT2-D1 cell
3
Normal Human Astrocytes
3
OCI-AML3
3
OCI-LY7
3
PA-TU-8988T cell
3
PANC-1 cell
3
PC-3
3
PC-9
3
REH cell
3
RKO
3
RPMI8226
3
RWPE1
3
SAEC
3
SK-N-MC
3
SK-N-SH_RA
3
SW480
3
Saos-2 cell
3
T cell
3
T-47D cell
3
Th17 cell
3
U-266 cell
3
U-87 MG
3
U2OS
3
U937
3
WERI-Rb-1
3
WI-38 cell
3
ZR-75-1 cell
3
adipose tissue
3
aortic adventitial fibroblast
3
bone marrow cell
3
cardiac myocyte cell derived cell line
3
caudate nucleus
3
chronic lymphocytic leukemia cell
3
colon cancer cell line
3
coronary artery
3
cortex of kidney
3
epithelial cell of prostate
3
epithelial ovarian cancer cell
3
esophageal epithelial cell
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
foreskin keratinocyte
3
foreskin melanocyte
3
glial cell
3
globus pallidus
3
glomerular visceral epithelial cell
3
hESC H9
3
hematopoietic cell
3
hematopoietic multipotent progenitor cell
3
iPS DF 4.7 Cell Line
Date released
2
February, 2021
2
June, 2020
Software used
18
r
8
chromhmm
6
encode-ccres
4
macs
1
abc
1
chicago
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
ENCODE3
award.rfa!
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR801NZA
released
Annotation file set
: Histone modifications annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759UOG
released
Annotation file set
: Histone modifications annotation for Blood B-cell_BRACKETLCD19+BRACKETR from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR924GPB
released
Annotation file set
: Accessible chromatin annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR006MLI
released
Annotation file set
: Accessible chromatin annotation for Blood B-cell (CD19+) from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP