Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
9
ChIP-seq
DNase-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
128
monocyte
55
HeLa-S3
44
islet of Langerhans
42
H1-hESC
42
neural progenitor cell
41
CD8-positive, alpha-beta T cell
40
endothelial cell
34
kidney
32
fibroblast
30
macrophage
28
heart
28
retina
27
hepatocyte
27
liver
26
K562
25
brain
23
EndoC_BH1
22
stomach
21
A549
21
smooth muscle cell
20
breast cancer cell
20
pancreatic ductal cell
20
pigmented layer of retina
19
HFFc6
19
lung
19
pericyte cell
19
subcutaneous adipose tissue
18
embryonic stem cell
18
placenta
17
B cell
17
epithelial cell of proximal tubule
17
pancreatic beta cell
17
small intestine
16
adipose tissue
16
adrenal gland
16
endothelial cell of hepatic sinusoid
16
pancreatic acinar cell
16
regulatory T cell
15
adipocyte
15
induced pluripotent stem cell
15
muscle of arm
15
muscle of leg
15
pancreatic alpha cell
14
glomerular endothelial cell
14
heart left ventricle
14
thymus
13
T cell
13
keratinocyte
13
large intestine
13
muscle of back
13
pancreatic delta cell
12
HepG2
12
astrocyte
12
coronary artery
12
excitatory neuron
12
left lung
12
neuroblastoma cell
12
tibial nerve
11
GM12878
11
T-helper 1 cell
11
hematopoietic multipotent progenitor cell
11
lymphoblastoid cell line
11
natural killer cell
10
gastric cancer cell
10
pancreatic stellate cell
10
right atrium auricular region
10
right lung
10
spinal cord
10
substantia nigra
9
MCF-7
9
Rhabdomyosarcoma
9
cardiomyocytes
9
caudate nucleus
9
common myeloid progenitor, CD34-positive
9
diffuse intrinsic pontine glioma
9
erythroblast
9
liposarcoma
9
mesenchymal stem cell
9
omental fat pad
9
skeletal muscle satellite cell
9
spleen
9
tibial artery
8
B-lymphoblastoid cell line
8
T-helper 17 cell
8
cerebellum
8
fibroblast cell line
8
frontal cortex
8
renal pelvis
8
retinal pigment epithelial cell
8
right kidney
8
skeletal muscle fiber
7
Ammon's horn
7
CD4-positive, alpha-beta T cell
7
H9
7
amygdala
7
aorta
7
ascending aorta
7
body of pancreas
7
cardiac muscle cell
7
endothelial cell of umbilical vein
7
esophageal adenocarcinoma
7
fibroblast of cardiac tissue
7
glomerular visceral epithelial cell
7
left kidney
7
lymphocyte
7
mature neutrophil
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
pancreas
7
putamen
7
temporal lobe
6
Chondroid Chordoma
6
anterior cingulate cortex
6
chondrocyte
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
left cardiac atrium
6
mammary gland epithelial cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
neutrophil
6
nucleus accumbens
6
plasma cell
6
renal cortex interstitium
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD8-positive, alpha-beta memory T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
GM19238
5
GM19239
5
GM19240
5
Glomerular Capillary Endothelial Cell
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Monocyte
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
T-helper 2 cell
5
cardiomyocytes (cardiac muscle cell)
5
enterocyte
5
foreskin fibroblast
5
glutamatergic neuron
5
heart right ventricle
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
mammary epithelial cell
5
mast cell
5
mesangial cell
5
osteoblast
5
osteosarcoma
5
prostate cancer cell line
5
prostate gland
5
psoas muscle
5
skeletal muscle tissue
5
testis
5
type I muscle cell
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
CD4-positive helper T cell
Life stage
unknown
3
adult
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
DNase-seq
relevant_life_stage!
unknown
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR766TCB
released
Annotation file set
: Chromatin states for BSS00190 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR611ILN
released
Annotation file set
: Chromatin states for BSS00189 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR381UMM
released
Annotation file set
: Chromatin states for BSS00188 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP