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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
111
monocyte
87
heart
82
stomach
74
kidney
70
brain
67
muscle of arm
66
lung
63
HeLa-S3
61
A549
61
small intestine
58
adrenal gland
58
placenta
57
muscle of leg
55
large intestine
54
muscle of back
53
common myeloid progenitor, CD34-positive
52
left lung
47
thymus
46
CD8-positive, alpha-beta T cell
45
H1-hESC
45
right lung
44
liver
43
neural progenitor cell
42
hematopoietic multipotent progenitor cell
41
B cell
41
right kidney
40
K562
40
renal cortex interstitium
40
renal pelvis
38
retina
36
left kidney
33
spinal cord
32
CD4-positive, alpha-beta memory T cell
32
heart left ventricle
31
endothelial cell
30
fibroblast
30
spleen
27
adipose tissue
25
MCF-7
25
islet of Langerhans
24
smooth muscle cell
23
hepatocyte
22
CD8-positive, alpha-beta memory T cell
22
foreskin keratinocyte
22
pericyte cell
22
sigmoid colon
22
tibial nerve
21
T cell
21
adipocyte
21
body of pancreas
21
macrophage
20
breast cancer cell
20
keratinocyte
20
mononuclear cell
20
pancreas
20
pigmented layer of retina
20
trophoblast cell
19
caudate nucleus
19
natural killer cell
19
psoas muscle
19
regulatory T cell
18
HFFc6
18
foreskin fibroblast
18
heart right ventricle
18
mesenchymal stem cell
17
coronary artery
17
endothelial cell of umbilical vein
17
gastrocnemius medialis
17
ovary
17
tibial artery
16
CD14-positive monocyte
16
cardiac muscle cell
16
chorionic villus
16
embryonic stem cell
16
fibroblast of cardiac tissue
16
muscle of trunk
16
retinal pigment epithelial cell
16
right atrium auricular region
16
thyroid gland
16
transverse colon
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
GM12878
15
fibroblast of lung
15
layer of hippocampus
15
mammary gland epithelial cell
15
skeletal muscle tissue
15
substantia nigra
15
testis
14
H9
14
HepG2
14
T-helper 1 cell
14
ascending aorta
14
astrocyte
14
endocrine pancreas
14
neutrophil
14
omental fat pad
13
Peyer's patch
13
T-helper 17 cell
13
T-helper 2 cell
13
bronchial epithelial cell
13
neurosphere
13
osteoblast
13
pancreatic ductal cell
13
skeletal muscle myoblast
13
subcutaneous adipose tissue
12
EndoC_BH1
12
aorta
12
cerebellum
12
excitatory neuron
12
neuroblastoma cell
12
pancreatic beta cell
12
prostate gland
12
skeletal muscle satellite cell
11
Ammon's horn
11
endothelial cell of hepatic sinusoid
11
fibroblast of dermis
11
frontal cortex
11
left renal cortex interstitium
11
left renal pelvis
11
mammary epithelial cell
11
putamen
11
right renal pelvis
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
esophagus squamous epithelium
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
SK-N-DZ
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
erythroblast
9
kidney tubule cell
9
liposarcoma
9
neuronal stem cell
9
pancreatic delta cell
9
parathyroid adenoma
9
right renal cortex interstitium
9
tongue
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
NAMALWA cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
esophagus
8
esophagus muscularis mucosa
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
skeletal muscle fiber
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
IMR-90
7
SK-N-MC
7
SK-N-SH
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
hepatic stellate cell
7
mature neutrophil
7
mesendoderm
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
Date released
1
February, 2021
1
February, 2024
1
June, 2020
Software used
2
macs
1
bedops
1
pepatac
Lab
2
AMP-T2D consortium
Jesse Engreitz, Stanford University
1
Stephen S. Rich Lab @UVA
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
lab.title!
Jesse Engreitz, Stanford University
Showing 3 of 3 results
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Download
FileSet
DSR204EGG
released
Annotation file set
: A canonical set of CD4+ T cell peaks
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR365EBN
released
Annotation file set
: Histone modifications annotation for Blood CD4+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR209TYC
released
Annotation file set
: Accessible chromatin annotation for Blood CD4+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP