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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
0
variant allelic effects
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
22
fibroblast
13
endothelial cell
13
macrophage
12
excitatory neuron
9
pericyte cell
9
smooth muscle cell
7
T cell
7
astrocyte
6
enterocyte
5
erythroblast
5
inhibitory neuron
5
skeletal muscle fiber
4
cortical cell of adrenal gland
4
pancreatic acinar cell
4
type II pneumocyte
3
B cell
3
basal cell
3
colon epithelial cell
3
goblet cell
3
keratinocyte
3
mesothelial cell
3
myofibroblast cell
3
pancreatic ductal cell
3
skeletal muscle satellite cell
2
Muller cell
2
Schwann cell
2
adipocyte
2
blood vessel smooth muscle cell
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
endothelial cell of lymphatic vessel
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of esophagus
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
glutamatergic neuron
2
hepatocyte
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mast cell
2
mesangial cell
2
oligodendrocyte precursor cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
parietal cell
2
peptic cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
thyroid follicular cell
2
type I pneumocyte
2
vascular associated smooth muscle cell
1
CD4-positive, alpha-beta T cell
1
CD8-positive, alpha-beta T cell
1
Satellite Cells, Skeletal Muscle
1
alveolar macrophage
1
basal cell of epidermis
1
bronchial goblet cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated cell
1
ciliated epithelial cell
1
club cell
1
colon goblet cell
1
eccrine cell
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glial cell
1
granular cell of epidermis
1
granulosa cell
1
hepatic stellate cell
1
hepatoblast
1
intestinal tuft cell
1
islet of Langerhans
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte of B lineage
1
mature NK T cell
1
megakaryocyte
1
melanocyte
1
memory B cell
1
metanephros
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
neuron
1
non keratinizing barrier epithelial cell
1
oligodendrocyte
1
pancreatic delta cell
1
pancreatic endocrine cell
1
paneth cell
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
plasma cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
retinal bipolar neuron
1
retinal pigment epithelial cell
1
skeletal muscle fibroblast
1
skin fibroblast
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type II cell of adrenal cortex
1
type II muscle cell
1
ureteric bud
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Date released
1
November, 2021
Software used
1
macs
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
Showing 1 of 1 results
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Download
FileSet
DSR552LZW
released
Annotation file set
: Accessible chromatin annotation of T Lymphocyte 1 (CD8+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE