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Schema
Citing CMDGA
Clear Filters
Annotation type
30
histone modifications
6
target gene predictions
5
accessible chromatin
3
gene expression
2
chromatin state
1
candidate regulatory elements
Annotation Category
3
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
1
DNase-seq
1
scRNA-seq
Available data
3
tsv
1
bed bed3+
1
txt
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
21
heart
20
stomach
18
A549
17
brain
17
lung
16
muscle of arm
15
adrenal gland
15
monocyte
15
small intestine
14
kidney
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
12
hepatocyte
11
B cell
11
hematopoietic multipotent progenitor cell
11
neural progenitor cell
11
right lung
11
thymus
10
T-helper 1 cell
10
T-helper 17 cell
10
regulatory T cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
H1-hESC
9
extended pluripotent stem (EPS) cells
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
EndoC_BH1
8
liver
7
CD8-positive, alpha-beta memory T cell
7
spinal cord
7
spleen
6
K562
6
T-helper 2 cell
6
adipose tissue
6
body of pancreas
6
endothelial cell
6
heart left ventricle
6
mononuclear cell
6
pancreatic ductal cell
5
MCF-7
5
islet of Langerhans
5
ovary
5
sigmoid colon
5
tibial nerve
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
foreskin keratinocyte
4
frontal cortex
4
gastrocnemius medialis
4
heart right ventricle
4
muscle of trunk
4
natural killer cell
4
omental fat pad
4
psoas muscle
4
retina
4
right atrium auricular region
4
skeletal muscle tissue
4
testis
4
thyroid gland
4
transverse colon
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
HeLa-S3
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Peyer's patch
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipocyte
3
aorta
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
coronary artery
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
epithelial cell of proximal tubule
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
glomerular endothelial cell
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
layer of hippocampus
3
mammary gland epithelial cell
3
memory B cell
3
mesenchymal stem cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
skeletal muscle myoblast
3
skeletal muscle satellite cell
3
smooth muscle cell
3
substantia nigra
3
temporal lobe
3
tibial artery
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Ammon's horn
2
Brodmann (1909) area 46
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T follicular helper cell
2
T47D
2
angular gyrus
2
ascending aorta
2
astrocyte
2
breast epithelium
2
bronchial epithelial cell
2
cardiomyocytes (cardiac muscle cell)
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endodermal cell
2
endothelial cell of umbilical vein
2
epithelial cell of prostate
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
gamma-delta T cell
2
glomerular visceral epithelial cell
Life stage
2
adult
Date released
February, 2021
2
May, 2021
1
August, 2021
1
September, 2022
Software used
4
r
1
seurat
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
4
AMP
RFA
3
AMP
1
AMP2
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR252HKA
released
Annotation file set
: Candidate regulatory elements for BSS00069 AG20443 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR072FLD
released
Annotation file set
: GSE118165 gene expression annotation of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579KZW
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ARP
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for CD8-positive, alpha-beta T cell
Lab:
Katalin Susztak, Upenn
Project:
AMP